Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E13
         (1064 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075095-1|AAL79357.1|  815|Drosophila melanogaster pygopus prot...    30   6.2  
AY058500-1|AAL13729.1|  815|Drosophila melanogaster LD18280p pro...    30   6.2  
AF457206-1|AAL91369.1|  815|Drosophila melanogaster pygopus prot...    30   6.2  
AE014297-4758|AAF57161.1|  815|Drosophila melanogaster CG11518-P...    30   6.2  
AY113383-1|AAM29388.1|  242|Drosophila melanogaster RE04770p pro...    29   8.2  
AE014296-227|AAF47476.2|  242|Drosophila melanogaster CG9184-PA,...    29   8.2  

>AY075095-1|AAL79357.1|  815|Drosophila melanogaster pygopus
           protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = -3

Query: 468 PPPLXSXGPVXESGXPRXGXSXXGGPIFGPGXVRGPQTLXGSXXLPPXXXHXSG 307
           PPPL S  P+  +G    G    GGPI GPG   GP  L G   + P   +  G
Sbjct: 343 PPPLHS--PLG-NGPTGHGSHMPGGPIPGPGP--GPGGLVGPGGISPAHGNNPG 391


>AY058500-1|AAL13729.1|  815|Drosophila melanogaster LD18280p
           protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = -3

Query: 468 PPPLXSXGPVXESGXPRXGXSXXGGPIFGPGXVRGPQTLXGSXXLPPXXXHXSG 307
           PPPL S  P+  +G    G    GGPI GPG   GP  L G   + P   +  G
Sbjct: 343 PPPLHS--PLG-NGPTGHGSHMPGGPIPGPGP--GPGGLVGPGGISPAHGNNPG 391


>AF457206-1|AAL91369.1|  815|Drosophila melanogaster pygopus
           protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = -3

Query: 468 PPPLXSXGPVXESGXPRXGXSXXGGPIFGPGXVRGPQTLXGSXXLPPXXXHXSG 307
           PPPL S  P+  +G    G    GGPI GPG   GP  L G   + P   +  G
Sbjct: 343 PPPLHS--PLG-NGPTGHGSHMPGGPIPGPGP--GPGGLVGPGGISPAHGNNPG 391


>AE014297-4758|AAF57161.1|  815|Drosophila melanogaster CG11518-PA
           protein.
          Length = 815

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = -3

Query: 468 PPPLXSXGPVXESGXPRXGXSXXGGPIFGPGXVRGPQTLXGSXXLPPXXXHXSG 307
           PPPL S  P+  +G    G    GGPI GPG   GP  L G   + P   +  G
Sbjct: 343 PPPLHS--PLG-NGPTGHGSHMPGGPIPGPGP--GPGGLVGPGGISPAHGNNPG 391


>AY113383-1|AAM29388.1|  242|Drosophila melanogaster RE04770p
           protein.
          Length = 242

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
 Frame = +2

Query: 269 PPLXXXXPXXXASPDXWXXXGGSXXEPX-RVWGPRTXPG-PKMGPPXXDXP 415
           PP     P     P  W     +   P  R WGP   PG P  GPP    P
Sbjct: 93  PPEDQQHPRQYGYPPQWSPGPPAYPPPPQRPWGPPPPPGPPPPGPPPPPGP 143


>AE014296-227|AAF47476.2|  242|Drosophila melanogaster CG9184-PA,
           isoform A protein.
          Length = 242

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
 Frame = +2

Query: 269 PPLXXXXPXXXASPDXWXXXGGSXXEPX-RVWGPRTXPG-PKMGPPXXDXP 415
           PP     P     P  W     +   P  R WGP   PG P  GPP    P
Sbjct: 93  PPEDQQHPRQYGYPPQWSPGPPAYPPPPQRPWGPPPPPGPPPPGPPPPPGP 143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,494,530
Number of Sequences: 53049
Number of extensions: 428347
Number of successful extensions: 635
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5474209272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)