Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E12
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0700 + 20797600-20798064                                         30   2.9  
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    29   3.8  
10_06_0033 + 9865963-9866090,9868173-9868253,9868358-9868375,986...    29   5.0  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    29   6.7  

>07_03_0700 + 20797600-20798064
          Length = 154

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 308 IALYCLEIILTSFLIYGAHKRIISYMKWFY 397
           +A  C  I+ TSFLIYG+ K I    +W+Y
Sbjct: 1   MAFLC-SIVATSFLIYGSAKEIPRGHRWWY 29


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +2

Query: 224 LHSYGVHYQKNVFSV-YHGITTGVPTELSIALYCL 325
           LH +G+H  K+++S+ Y  +TTG      +A+Y L
Sbjct: 358 LHLFGLHMNKSLYSLSYTCVTTGTAGLFFVAIYLL 392


>10_06_0033 +
           9865963-9866090,9868173-9868253,9868358-9868375,
           9869257-9869374,9869724-9869795,9870049-9870066,
           9870231-9870551,9870652-9870760,9871562-9871736,
           9871761-9871828,9873147-9873227,9873541-9873767
          Length = 471

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 774 PVHVTEDTKSKLEIKIKMTIAKLINNLKINKTYTVFGSTVVLL 646
           P    +DT S+L  K+K  IA++  N+K      VFG+  V +
Sbjct: 118 PPSTIKDTGSRLHSKLKEAIAQISINVKTGLEKNVFGNHFVTM 160


>05_07_0332 -
           29332520-29332818,29333511-29333725,29334380-29334408,
           29334956-29335045,29335120-29335155,29335222-29336553,
           29337331-29337497,29337519-29337724,29337815-29338036,
           29338332-29338381,29338754-29338870,29339471-29339551,
           29339656-29339694,29340464-29340636,29340769-29340826,
           29340934-29340987,29341066-29341613,29341695-29341755,
           29342180-29342260,29342448-29342630,29342908-29343162,
           29343304-29343423,29343497-29344901,29344988-29345085,
           29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 508 TVHTNILDPSCEESHQETRN 567
           TV TN++DP CEES   T N
Sbjct: 425 TVCTNLVDPHCEESIDMTHN 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,790,386
Number of Sequences: 37544
Number of extensions: 396470
Number of successful extensions: 876
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)