Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E12
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-P...    37   0.043
AE014297-1561|AAF54843.3|  435|Drosophila melanogaster CG11608-P...    33   0.70 
BT023589-1|AAY84989.1|  144|Drosophila melanogaster IP09353p pro...    31   1.6  
U17223-1|AAC46913.2|  609|Drosophila melanogaster Wee1 kinase pr...    29   6.6  
AY118942-1|AAM50802.1|  609|Drosophila melanogaster LD27552p pro...    29   6.6  
AE014134-1187|AAF52453.2|  609|Drosophila melanogaster CG4488-PA...    29   6.6  

>AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-PA
           protein.
          Length = 260

 Score = 36.7 bits (81), Expect = 0.043
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
 Frame = +2

Query: 134 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNVFSVYHGITTGVPTEL--S 307
           F +CC+C  LR GVL+FG I  F + F+      G   +    + Y       P  L  +
Sbjct: 112 FTKCCYCYSLRFGVLLFGCI--FLTWFIYITIGTGFMMECIFPNEYQRSLIPAPAALKAT 169

Query: 308 IALYCLEIILTSFLIYGAHKRIISYMKWFYYFTVTTTVAAILIQILEFTSYRSFGFIIEV 487
           +      II+++ L  G H    +    F  F V T +  I++ I   T Y SF  II +
Sbjct: 170 MVFSFFGIIVSAMLCLGVHN---NNEMLFLPFLVFTPI-WIIVHIFALTVY-SFNTIIII 224

Query: 488 CLFSASGLFIQIYLIL 535
                  L +  +L++
Sbjct: 225 LTVITMLLLVYAWLVV 240



 Score = 29.5 bits (63), Expect = 6.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 134 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNV 259
           F +CCF +PL  G ++ G I + F    +  HS    + K V
Sbjct: 3   FKKCCFFLPLNVGCIIIGAIFITFHVGELITHSDDTIFIKQV 44


>AE014297-1561|AAF54843.3|  435|Drosophila melanogaster CG11608-PA
           protein.
          Length = 435

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -1

Query: 807 LTLXYRTSYMNPVHVTEDTKSKLEIKIKMTIAKLINN--LKINKTY 676
           LTL  +  Y  P H+T++T + ++  +   I +LINN  +KI KT+
Sbjct: 366 LTLASKLPYAVPHHITDETWNHMDFLLANNINELINNPVIKIIKTF 411


>BT023589-1|AAY84989.1|  144|Drosophila melanogaster IP09353p
           protein.
          Length = 144

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 29/147 (19%), Positives = 60/147 (40%), Gaps = 1/147 (0%)
 Frame = +2

Query: 134 FGRCCFCMPLRKGVLVFGYINLFFSAFLVGLHSYGVHYQKNVFSVYHGITTGVPTELSIA 313
           F +CCF +PL  G ++ G I   F  F VG     +     +F          P  +S  
Sbjct: 3   FKKCCFFLPLNVGCIIIGAI---FITFHVG---ELITSDDTIFIKQVSHKWWAPVIMS-P 55

Query: 314 LYCLEIILTSFLIYGAHKRIISY-MKWFYYFTVTTTVAAILIQILEFTSYRSFGFIIEVC 490
           +  +  + +  L+Y A K    + + W   + +  ++   L+ +++    +    I+ V 
Sbjct: 56  ILTIGTLSSILLVYAASKSKRGFVLMWIIIYAIILSL-YFLMAVVQLARSKPSPIILAVQ 114

Query: 491 LFSASGLFIQIYLILHVRSLIKKLEMD 571
           +F   GL   + ++L     +  ++ D
Sbjct: 115 VFIIVGLVYSLLIVLAFYRYLSSVDSD 141


>U17223-1|AAC46913.2|  609|Drosophila melanogaster Wee1 kinase
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -1

Query: 783 YMNPVHVTEDTKSKLEIKIKMTIAKLINNLKINK 682
           + +P+    D+KSKL++ +++T+ K  N + +NK
Sbjct: 512 FSHPILSAVDSKSKLQLGLELTVEKRKNEILMNK 545


>AY118942-1|AAM50802.1|  609|Drosophila melanogaster LD27552p
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -1

Query: 783 YMNPVHVTEDTKSKLEIKIKMTIAKLINNLKINK 682
           + +P+    D+KSKL++ +++T+ K  N + +NK
Sbjct: 512 FSHPILSAVDSKSKLQLGLELTVEKRKNEILMNK 545


>AE014134-1187|AAF52453.2|  609|Drosophila melanogaster CG4488-PA
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -1

Query: 783 YMNPVHVTEDTKSKLEIKIKMTIAKLINNLKINK 682
           + +P+    D+KSKL++ +++T+ K  N + +NK
Sbjct: 512 FSHPILSAVDSKSKLQLGLELTVEKRKNEILMNK 545


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,290,728
Number of Sequences: 53049
Number of extensions: 696439
Number of successful extensions: 1512
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)