Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E11
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016447-9|AAG24009.1|  233|Caenorhabditis elegans Hypothetical ...    80   2e-15
AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical ...    72   5e-13
AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical ...    72   6e-13
AF039047-4|AAB94225.1|  224|Caenorhabditis elegans Hypothetical ...    66   2e-11
Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical pr...    61   9e-10
Z81109-16|CAB03252.2|  221|Caenorhabditis elegans Hypothetical p...    53   2e-07
Z70755-4|CAA94783.2|  239|Caenorhabditis elegans Hypothetical pr...    35   0.067
AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   7.7  
AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...    28   7.7  

>AF016447-9|AAG24009.1|  233|Caenorhabditis elegans Hypothetical
           protein C54F6.4 protein.
          Length = 233

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
 Frame = +1

Query: 316 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYF 495
           IC  IY+QG    I   PFL G ++    L+YG++  D  +I +N  G+ + +   M + 
Sbjct: 17  ICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAGIPIAVFNAMFFL 76

Query: 496 NYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKE 675
            +S+ K     Q+ +   +   ++      +P +    F  I+   + +   SPL GL+ 
Sbjct: 77  YFSKPKKYYMTQLSIVTIIILTMLMLIHF-NPNVQFLGFVCIVLNLITF--GSPLAGLRV 133

Query: 676 IIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFLVVXT-WGLML 813
           +++++    +PF + L   +V  +W LYGI++++ FLV+ T  G+M+
Sbjct: 134 VLRDREVITLPFVLCLVQLIVQCLWNLYGILIQDFFLVIPTAVGIMI 180


>AL031633-6|CAA21014.3|  225|Caenorhabditis elegans Hypothetical
           protein Y39A1A.8 protein.
          Length = 225

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
 Frame = +1

Query: 307 GSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVM 486
           G  IC  I  +GS+ G    PFL   +   L +QYG +  DD +   N  G  L   Y+M
Sbjct: 28  GLQICHRIKTRGSSEGTSPAPFLLSFLSCGLFIQYGLLKDDDVITYCNGIGCFLQACYLM 87

Query: 487 IYFNYSQQKVKVWAQIGLA-GAVSAALIGYAQTEDPKLVETRF-GTIITAFMFYLIASPL 660
            ++  ++ +  +   I +  G +   +   A + +  L +T + G          +A+PL
Sbjct: 88  YFYYMTRNRRFLNKVISIELGIIGIVVYWVAHSTNSHLTKTTYVGNYCIFLNICSVAAPL 147

Query: 661 FGLKEIIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFLVV 792
           F + ++++NKS+E +P  + ++  VV   W+ YG I+ +  ++V
Sbjct: 148 FDIGKVVRNKSSESLPLPLCVACFVVCLQWMFYGYIVDDIVILV 191


>AF045645-2|AAC02609.1|  299|Caenorhabditis elegans Hypothetical
           protein K02D7.5 protein.
          Length = 299

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 43/159 (27%), Positives = 77/159 (48%)
 Frame = +1

Query: 316 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYF 495
           IC  I +QG+   I  +PFL GV+     L+YG +  D  MI VN+ G+A    Y + + 
Sbjct: 27  ICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGLLKMDYVMIIVNVVGVACMAFYCVFFL 86

Query: 496 NYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKE 675
            YS  K     Q+ L  +    ++ +   + P L     G I   F      +PL GL  
Sbjct: 87  IYSLPKKTFTCQLILVTSTIGGMVLWIALK-PNL--DYLGVICMTFNIMNFGAPLAGLGV 143

Query: 676 IIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFLVV 792
           +++N+    +P  + ++  +V+  W LYG ++ + ++++
Sbjct: 144 VLKNREVSTLPLPMCVANFLVSSQWCLYGNLVSDIYIII 182


>AF039047-4|AAB94225.1|  224|Caenorhabditis elegans Hypothetical
           protein K11D12.5 protein.
          Length = 224

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 36/160 (22%), Positives = 70/160 (43%)
 Frame = +1

Query: 313 FICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIY 492
           F+  D +K+G+  G   + F+  +++    L++GY+  D T I +N   L     YV  +
Sbjct: 23  FMVLDWHKRGTADGFSSVNFVLPMLVQSFWLRHGYMTNDQTNIIINSINLVFFAFYVSAF 82

Query: 493 FNYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLK 672
             Y  ++  +  QI  A         Y  T D   +    G++      + +   ++ +K
Sbjct: 83  AYYQPKRKYLIGQIVAAALAVKVAFAYVDTHDSASINDAMGSMAAGAQIFSLVGGIYEIK 142

Query: 673 EIIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFLVV 792
             I   +TE +P     +   +   WLL+GI+  N+F+ +
Sbjct: 143 RAISMGTTEYIPAGFQFAIFTLILQWLLFGILHGNQFIAI 182


>Z70306-1|CAA94322.1|  355|Caenorhabditis elegans Hypothetical
           protein C06G8.1 protein.
          Length = 355

 Score = 61.3 bits (142), Expect = 9e-10
 Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = +1

Query: 316 ICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYF 495
           IC  I+K+  T+ I   PFL GVV     + YG++  D T+  V    + L   Y + Y+
Sbjct: 33  ICRQIWKRKDTKEISGAPFLMGVVGGCCWMTYGWLKNDGTVKWVTGCQVILYTTYTIFYW 92

Query: 496 NYSQQKVKVWAQI-GLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLK 672
             +++K+ +  ++ G+ G +  +L+        K+     G +         A+PL G++
Sbjct: 93  CMTKKKLYISLKVLGVIG-ICTSLVLAVHFFGMKIFHP-LGIVCLTLNIADFAAPLGGIR 150

Query: 673 EIIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFLVVXTWGL 807
            +I+  +T  +P  + ++  +V+  W LYG +L+N F ++   G+
Sbjct: 151 VVIRRWATSTLPLPLCIANFLVSTEWFLYG-LLKNDFYLIFPNGV 194


>Z81109-16|CAB03252.2|  221|Caenorhabditis elegans Hypothetical
           protein R10D12.9 protein.
          Length = 221

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 30/159 (18%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
 Frame = +1

Query: 313 FICWDIYKQGSTRGIG-IMPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMI 489
           ++  D  K+G++ G   ++  + G++ +   L++G++  + T I +N   L     Y+  
Sbjct: 23  YLVLDWKKRGTSDGFSAVVLIIPGIIQSFW-LRHGWMTNEWTHIIINTVNLTALSFYISA 81

Query: 490 YFNYSQQKVKVWAQIGLAGAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGL 669
           Y  Y   +  +  Q+  A  +      Y  + D +   +  GT+        +   ++ +
Sbjct: 82  YAYYQSNRKNLIGQLISAVIIVKCAFFYVDSHDAEHTNSAMGTVAAGAQILGLGGRVYEM 141

Query: 670 KEIIQNKSTEGMPFXIILSGTVVTFMWLLYGIILRNKFL 786
           +  ++  +TE +P  +  + + +   WLL+GI+  N+F+
Sbjct: 142 RRAVKLGTTEYIPAFMQFAVSALMAQWLLFGIVTGNQFI 180


>Z70755-4|CAA94783.2|  239|Caenorhabditis elegans Hypothetical
           protein K06A4.4 protein.
          Length = 239

 Score = 35.1 bits (77), Expect = 0.067
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
 Frame = +1

Query: 364 MPFLGGVVMTILNLQYGYILRDDTMIQVNMFGLALNIIYVMIYFNYSQQKVK-VWAQIGL 540
           +P++  V+ + L L+Y   LRD  +I +  + +++ + +V+    Y  ++ K +    G+
Sbjct: 60  IPYICAVIGSALWLRYSIFLRDTKLILLQTYAVSMQLFFVIALIFYRTKRRKLIRLMTGI 119

Query: 541 AGAVSAAL--IGYAQTEDPK 594
           A A+S     IG    ED K
Sbjct: 120 AAALSLLFLYIGNMNDEDGK 139



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = +1

Query: 544 GAVSAALIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPFXIIL 723
           G VSA+ +    T +  LV + F T        LI SP+  + + ++ +S++       +
Sbjct: 6   GTVSASRLFAMYTSN--LVWSLFLTSTALHAVALITSPVQAVHKWVRRQSSDSDTPIPYI 63

Query: 724 SGTVVTFMWLLYGIILRN-KFLVVXTWGLML 813
              + + +WL Y I LR+ K +++ T+ + +
Sbjct: 64  CAVIGSALWLRYSIFLRDTKLILLQTYAVSM 94


>AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical
           protein Y47D3A.1 protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 562 LIGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEI 678
           L+   + +DPKLVE    +IIT   F +  + +F  KE+
Sbjct: 208 LLWLNKQKDPKLVENFINSIITCSKFTIFLTSIFEKKEL 246


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 392 VITTPPRNGMMPIPRVLPCLYMSQHM--KLPGEHLPNG 285
           VI+ PP N   P+P   P  +  QH   +LPG+  P G
Sbjct: 656 VISIPPPNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAG 693


>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
 Frame = +1

Query: 538 LAGAVSAAL--IGYAQTEDPKLVETRFGTIITAFMFYLIASPLFGLKEIIQNKSTEGMPF 711
           +A  VSAAL  IG+    D   V  +       F+  + ++    +   I N    G   
Sbjct: 23  VASVVSAALFFIGWWLMIDTAAVTNKENWTNVYFIITVASTVAMFMVNAISNSQVRGESL 82

Query: 712 XIILSGTVVTFMWLLYGIILRNKFLVVXTW 801
              L GT  + +WL+   ++    LV  TW
Sbjct: 83  HEGLLGTKGSRLWLMAAFVVSFASLVAATW 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,853
Number of Sequences: 27780
Number of extensions: 368099
Number of successful extensions: 893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)