BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E10
(894 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro... 29 6.5
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,... 29 6.5
>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
protein.
Length = 1506
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 615 SNHGKTTTNFKRNGPGYSSMRESKTDERTYDF 710
S G+T +N N G+ SMRE +T +T D+
Sbjct: 703 SGDGETNSNRHSNESGFVSMREFRTSTQTTDY 734
>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
isoform A protein.
Length = 1571
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 615 SNHGKTTTNFKRNGPGYSSMRESKTDERTYDF 710
S G+T +N N G+ SMRE +T +T D+
Sbjct: 703 SGDGETNSNRHSNESGFVSMREFRTSTQTTDY 734
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,177,881
Number of Sequences: 53049
Number of extensions: 699413
Number of successful extensions: 1561
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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