Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E09
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 31 7.3
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 31 7.3
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 9.6
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 9.6
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 9.6
BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein pr... 30 9.6
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 9.6
AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens ... 30 9.6
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 9.6
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein. 30 9.6
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 9.6
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 375 IRTTTEARRPGTARNTRRPKPTELSARCRERSETPRHRNKP 253
+R + R TAR TRR K + R RERS+TP P
Sbjct: 984 MREVEQQRIRSTARKTRRDKEELRAQRRRERSKTPPSNLSP 1024
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 375 IRTTTEARRPGTARNTRRPKPTELSARCRERSETPRHRNKP 253
+R + R TAR TRR K + R RERS+TP P
Sbjct: 1059 MREVEQQRIRSTARKTRRDKEELRAQRRRERSKTPPSNLSP 1099
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 369 TTTEARRPGTARNTRRPKP---TELSARCRERSETPRHRNKPSRP 244
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 369 TTTEARRPGTARNTRRPKP---TELSARCRERSETPRHRNKPSRP 244
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 220 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 363
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 310 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 411
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 478 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 513
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 369 TTTEARRPGTARNTRRPKP---TELSARCRERSETPRHRNKPSRP 244
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AK131480-1|BAD18625.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ16652 fis, clone TESTI4036767. ).
Length = 325
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 421 PARSPLRAVQSREQGHQDHHRGP---APRHSEKHSASEADRAERS 296
P R P R+ H+ RGP AP+ S +H A + D R+
Sbjct: 92 PQRDPTHRAPQRDPTHRAPQRGPRHRAPQRSPRHRAPQRDPTHRA 136
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 369 TTTEARRPGTARNTRRPKP---TELSARCRERSETPRHRNKPSRP 244
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
Length = 1135
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 310 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 411
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 956 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 991
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 220 VWTPSRPNRSRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLC 363
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,002,530
Number of Sequences: 237096
Number of extensions: 1809871
Number of successful extensions: 7488
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7464
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -