Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E06
         (977 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74228-1|CAA52299.1|  491|Caenorhabditis elegans pha-1 protein.        28   8.8  
X73845-1|CAA52066.1|  491|Caenorhabditis elegans pha1 protein.         28   8.8  
AL032642-5|CAD91711.1|  453|Caenorhabditis elegans Hypothetical ...    28   8.8  
AL032642-4|CAA21655.1|  491|Caenorhabditis elegans Hypothetical ...    28   8.8  

>X74228-1|CAA52299.1|  491|Caenorhabditis elegans pha-1 protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 483 MQQTXKSRIRAVMTAVDENDRACIFYIDVHVIFHKHXVLSHF 358
           ++QT K  I  +   ++++ R C    DVH + HK  + S +
Sbjct: 149 LKQTMK--IMVIKIRIEDSKRVCCMITDVHQVIHKSLIGSDY 188


>X73845-1|CAA52066.1|  491|Caenorhabditis elegans pha1 protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 483 MQQTXKSRIRAVMTAVDENDRACIFYIDVHVIFHKHXVLSHF 358
           ++QT K  I  +   ++++ R C    DVH + HK  + S +
Sbjct: 149 LKQTMK--IMVIKIRIEDSKRVCCMITDVHQVIHKSLIGSDY 188


>AL032642-5|CAD91711.1|  453|Caenorhabditis elegans Hypothetical
           protein Y48A6C.5b protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 483 MQQTXKSRIRAVMTAVDENDRACIFYIDVHVIFHKHXVLSHF 358
           ++QT K  I  +   ++++ R C    DVH + HK  + S +
Sbjct: 111 LKQTMK--IMVIKIRIEDSKRVCCMITDVHQVIHKSLIGSDY 150


>AL032642-4|CAA21655.1|  491|Caenorhabditis elegans Hypothetical
           protein Y48A6C.5a protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 483 MQQTXKSRIRAVMTAVDENDRACIFYIDVHVIFHKHXVLSHF 358
           ++QT K  I  +   ++++ R C    DVH + HK  + S +
Sbjct: 149 LKQTMK--IMVIKIRIEDSKRVCCMITDVHQVIHKSLIGSDY 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,899,760
Number of Sequences: 27780
Number of extensions: 254633
Number of successful extensions: 312
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2542323834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)