Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E05
(1002 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0515 - 3864796-3865425 33 0.47
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.47
02_02_0240 + 8196140-8198248,8198381-8198650 33 0.47
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 33 0.47
12_02_1219 + 27096477-27096590,27096704-27097078 31 1.1
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 31 1.1
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 31 1.1
03_02_0765 + 11000724-11002496 31 1.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.9
10_08_0638 - 19503580-19503990 30 2.5
08_01_0059 - 394001-394708 30 2.5
12_01_0252 + 1868670-1869200,1870167-1871120 30 3.3
11_01_0252 + 1934505-1935032,1936001-1936957 30 3.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 3.3
01_01_0715 - 5542648-5543219,5543352-5543544 30 3.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.4
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759... 29 4.4
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 29 4.4
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 4.4
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 5.8
07_01_0479 + 3606663-3607448 29 5.8
06_03_0696 + 23617687-23617851,23618838-23619536 29 5.8
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 29 5.8
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 29 7.7
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 29 7.7
10_08_0213 - 15912048-15912716 29 7.7
09_02_0369 - 8012470-8013120 29 7.7
07_01_0080 + 587674-588510 29 7.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 7.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 7.7
03_02_0350 - 7734494-7734952,7735765-7736133 29 7.7
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.7 bits (71), Expect = 0.47
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXPXRP 840
PPPP P P PSV P P P PPP P P
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAA-SPPPPPPSPP 107
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP PP P PPPP
Sbjct: 85 PPPLPPPPPPPAASPPPP 102
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.47
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP+GPP P PPPP
Sbjct: 339 PPPKGPPPPPPAKGPPPP 356
Score = 32.3 bits (70), Expect = 0.62
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXPXR 837
PPPP P P P + P P P GPPP P +
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK 360
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 885 AGXXPPPRGPPXPXXXGXPPPPXXXAXRXXXP 980
A PPP PP P PPPP A P
Sbjct: 309 ASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXPXR 837
PPPP P P P P+ P G G PP P +
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PP PP P G PPPP
Sbjct: 331 PPKAAPPPPPPKGPPPPP 348
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 888 GXXPPPRGPPXPXXXGXPPPP 950
G PPP PP G PPPP
Sbjct: 361 GPSPPPPPPPGGKKGGPPPPP 381
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXPXRP 840
PPPPG P P S+ P P G PPP P +P
Sbjct: 621 PPPPGQNPYMPGPPRPYSMPPPPHMPTMATMVNPIGIPQPPPPLPPQP 668
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 32.7 bits (71), Expect = 0.47
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -2
Query: 839 GRXGXRGGGPXXPGXAAHAXXXGARGXXRTEGAXRGXXXXGAPPGGGG 696
G+ G GGG G + G RG G G G P GGGG
Sbjct: 283 GKGGGGGGGGNTGGGIGGSTGGGGRGAGAGVGGITGGGDGGFPGGGGG 330
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 839 GRXGXRGGGPXXPGXAAHAXXXGARGXXRTEGAXRGXXXXGAPPGGGG 696
G G RGGG G + G R EG G G GGGG
Sbjct: 95 GGYGQRGGGGGYGGGGGYGGGGGGGYGQRREGGYGGGGGYGGGRGGGG 142
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 949 GGGGXPXXXGXGGPRG-GGXXP 887
GGGG P G GGPRG GG P
Sbjct: 11 GGGGGPRGFGGGGPRGFGGGGP 32
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 946 GGGXPXXXGXGGPRG-GGXXP 887
GGG P G GGPRG GG P
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGP 24
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 946 GGGXPXXXGXGGPRG-GGXXP 887
GGG P G GGPRG GG P
Sbjct: 20 GGGGPRGFGGGGPRGFGGGGP 40
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 946 GGGXPXXXGXGGPRG-GGXXP 887
GGG P G GGPRG GG P
Sbjct: 28 GGGGPRGFGGGGPRGFGGGGP 48
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 946 GGGXPXXXGXGGPRG-GGXXP 887
GGG P G GGPRG GG P
Sbjct: 36 GGGGPRGFGGGGPRGFGGSKP 56
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 949 GGGGXPXXXGXGGPRGGG 896
GGGG P G GGPR GG
Sbjct: 19 GGGGGPRGCGGGGPRSGG 36
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -3
Query: 946 GGGXPXXXGXGGPRGGG 896
GGG P G GGPRGGG
Sbjct: 28 GGGGPRSGGGGGPRGGG 44
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3
Query: 949 GGGGXPXXXGXGGPRGGG 896
GGGG P G GGPRG G
Sbjct: 35 GGGGGPRGGGGGGPRGSG 52
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 961 AXXXGGGGXPXXXGXGGPRG-GGXXP 887
A GGG P G GGPRG GG P
Sbjct: 7 AAERSGGGNPRGGGGGGPRGCGGGGP 32
>03_02_0765 + 11000724-11002496
Length = 590
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 839 GRXGXRGGGPXXPGXAAHAXXXGARGXXRTEGAXRGXXXXGAPPGGGG 696
G G GGG G A GA G G G GA GGGG
Sbjct: 235 GLGGGAGGGGGLGGGAGGGLGGGAGGGGGLSGGAGGGLGGGAGAGGGG 282
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 888 GXXPPPRGPPXPXXXGXPPPP 950
G PPP+G P P PPPP
Sbjct: 39 GHMPPPQGAPPPFLAPPPPPP 59
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP PP P PPPP
Sbjct: 108 PPPPPPPSPPPSAPPPPP 125
>10_08_0638 - 19503580-19503990
Length = 136
Score = 30.3 bits (65), Expect = 2.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 696 PPPPRRRPXPXXAPXRP 746
PPPPR++P P P RP
Sbjct: 116 PPPPRKKPPPQPPPSRP 132
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 696 PPPPRRRPXPXXAPXRP 746
PPPPRR P P P RP
Sbjct: 18 PPPPRRAPPPPSPPIRP 34
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 985 PPGXXXRXAXXXGGGGXPXXXGXGGPRGGGXXPA 884
PP GGGG G GG GGG PA
Sbjct: 66 PPPPPLNWPTAGGGGGGSGGGGRGGAGGGGGAPA 99
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 985 PPGXXXRXAXXXGGGGXPXXXGXGGPRGGGXXPA 884
PP GGGG G GG GGG PA
Sbjct: 65 PPPPPLNWPMAGGGGGGSGGGGRGGAGGGGGAPA 98
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 697 PPPPG--GAPXXXXPRXAPSVR---XXPRAPXXXACAAXPGXXGPPPRXPXRP 840
PPPP AP P +PS P P A A P GP P P P
Sbjct: 322 PPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPP 374
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAP-----SVRXXPRAPXXXACAAXPGXXGPPPRXP 831
PPPP P PR +P RAP A P PPP P
Sbjct: 145 PPPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAGSPPPPPPP 194
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXP 831
PPPP G P P P P ++ P PPP P
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLP 595
>06_01_0978 +
7595641-7595843,7595952-7596072,7596176-7596253,
7596371-7596436,7596556-7596688,7596774-7596841,
7596930-7597002,7597097-7597158,7597240-7597633,
7597768-7597832
Length = 420
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPR 825
PPPP AP P AP+ PR G G P R
Sbjct: 9 PPPPEVAPPAPAPAPAPAPYQPPRLAVADGAGGGGGGGGKPCR 51
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRX-APSV--RXXPRAPXXXACAAXPGXXGPPPRXP 831
PPP GAP P AP + P P A P PPP P
Sbjct: 166 PPPTSGAPGAPIPNSGAPPAMYQTNPPQPAGPTSGAPPPVSAPPPAAP 213
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP PP P PPPP
Sbjct: 432 PPPEHPPPPESTSPPPPP 449
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP+ PP P PPPP
Sbjct: 74 PPPQTPPSPPPPPPPPPP 91
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXPXRP 840
PPPPG P P VR P P PG PPP P P
Sbjct: 202 PPPPGPFMRGPPPMGPPQVR--PGMPGGPPPGMRPGMP-PPPFRPGMP 246
>06_03_0696 + 23617687-23617851,23618838-23619536
Length = 287
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPPXXXA 962
PPP PP G PPPP A
Sbjct: 84 PPPPSPPATHDVGQPPPPPSLA 105
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPP 822
P PP P P+ P+ P A A + PG PPP
Sbjct: 39 PTPPPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPP 80
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -3
Query: 949 GGGGXPXXX-GXGGPRGGGXXPA 884
GGGG P G G P GGG PA
Sbjct: 302 GGGGQPNNAKGGGAPNGGGNHPA 324
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 885 AGXXPPPRGPPXPXXXGXPPPPXXXAXRXXXP 980
A PPP P P PPPP A + P
Sbjct: 17 AAAAPPPAAAPAPPPSQPPPPPLPFAQQAPPP 48
>10_08_0213 - 15912048-15912716
Length = 222
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 839 GRXGXRGGGPXXPGXAAHAXXXGARGXXRTEGAXRGXXXXGAPPGGGG 696
G G GGG G + + RG + GA G G GGGG
Sbjct: 150 GGHGGGGGGGQGGGYGSGSGYGSGRGYGQGGGAYGGGYASGGGGGGGG 197
>09_02_0369 - 8012470-8013120
Length = 216
Score = 28.7 bits (61), Expect = 7.7
Identities = 27/113 (23%), Positives = 30/113 (26%), Gaps = 4/113 (3%)
Frame = +1
Query: 184 PXPXPXXXXPGXXPXXXQXXXXXXPGPPLXXYAXXPXXLXRXXPPPVKRXPXRXLXGAPX 363
P P P P P Q P PP P PP P R P
Sbjct: 39 PPPPPPHDDPPLKPPPQQQFITAQPPPPDEPPLKPPPSFYPAVLPPEPPPPRR-----PA 93
Query: 364 GXPWVLXPGXXKXXXXXXPPPXR----GXXPAXPXXXXXXPXXXXPXXPGRRP 510
P+ G PP R P+ P P P P R+P
Sbjct: 94 ATPYSNREGVDDDDSHHVAPPPRRSPAARPPSAPETPLPLPCCEKPPPPPRQP 146
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP PP P PPPP
Sbjct: 91 PPPPPPPPPSSGSPPPPP 108
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +1
Query: 700 PPP----GGAPXXXXPRXAPSVRXXPRAPXXXACAAXPGXXGPPPRXP 831
PPP G AP PR V P P A PG G PP P
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 897 PPPRGPPXPXXXGXPPPP 950
PPP+ PP P PPPP
Sbjct: 268 PPPQVPPPPPQAPPPPPP 285
>03_02_0350 - 7734494-7734952,7735765-7736133
Length = 275
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 979 GXXXRXAXXXGGGGXPXXXGXGGPRGGG 896
G A GGGG G GGP GGG
Sbjct: 4 GGGASSALGGGGGGGGSGGGGGGPSGGG 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.150 0.534
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,569,910
Number of Sequences: 37544
Number of extensions: 321933
Number of successful extensions: 3349
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3001
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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