Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E05
         (1002 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.88 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   6.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.88
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 697 PPPPGGAPXXXXPRXAPSVRXXPRAP 774
           PPPPGGA     P+  P      RAP
Sbjct: 533 PPPPGGAVLNIPPQFLPPPLNLLRAP 558



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 900 PPRGPPXPXXXGXPPPP 950
           PP  PP P   G PP P
Sbjct: 581 PPPAPPPPPPMGPPPSP 597


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = -2

Query: 839 GRXGXRGGGPXXPGXAAHAXXXGARGXXRTE--GAXRGXXXXGAPPGGGG 696
           G  G  GGG      AA       +   + +  GA  G    GAP GGGG
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGG 217



 Score = 24.2 bits (50), Expect = 6.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 949 GGGGXPXXXGXGGPRGGG 896
           GGGG     G GG  GGG
Sbjct: 214 GGGGSSGGPGPGGGGGGG 231


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 800 GXAAHAXXXGARGXXRTEGAXRGXXXXGAPPGGGG 696
           G  A     GA G   + G   G    G+P GGGG
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706



 Score = 24.6 bits (51), Expect = 4.7
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -3

Query: 979 GXXXRXAXXXGGGGXPXXXGXGGPRGGG 896
           G   R +    GGG     G GG  GGG
Sbjct: 845 GGPLRGSSGGAGGGSSGGGGSGGTSGGG 872


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 982 PGXXXRXAXXXGGGGXPXXXGXGGPRG 902
           PG         GG G P   G  GPRG
Sbjct: 394 PGIAGPAGAPGGGEGRPGAPGPKGPRG 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.150    0.534 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,100
Number of Sequences: 2352
Number of extensions: 6989
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110174532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)