Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E03
(1085 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 5e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.023
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.053
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.092
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.12
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.49
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 30 0.65
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 1.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 4.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 6.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 7.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 8.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 5e-04
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 866 PPPPPXPXXQXXXXGPXXXXXXXT--PPPPPPPXSXXXXXPPPPPLXSXFXPP 1018
PPPPP P + P + PPPPPPP S P PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/46 (41%), Positives = 20/46 (43%)
Frame = +2
Query: 866 PPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPPLXS 1003
PPPPP P P + PPPPPP S PPPL S
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGR-SAPPPPPPRSAPSTGRQPPPLSS 381
Score = 32.7 bits (71), Expect = 0.092
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAPPPPP--TXLXXXXXPPPPSPPFXXXPPXXNXPXXP 1041
PPPPPP + APPPPP + PPP S P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +1
Query: 871 PPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXP----PXXNXPXX 1038
PP PP + APPP P PP SPP P P N
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 1039 PPPP 1050
PP P
Sbjct: 290 PPLP 293
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +1
Query: 871 PPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PP PP + A PPPPP+ PP + P PPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRG------KPPIGNGSSNSSLPPPPPPP 343
Query: 1051 R 1053
R
Sbjct: 344 R 344
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 876 PPXPXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPP 986
PP P + RPPPPP P G PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 30.7 bits (66), Expect = 0.37
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPP 1047
PPPPPP + PPPP PPP S P PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPP--------PPPRSNAAGSIPLPPQGRSAPPP 363
Query: 1048 PRXXXXP 1068
P P
Sbjct: 364 PPPRSAP 370
Score = 29.9 bits (64), Expect = 0.65
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 15/77 (19%)
Frame = +3
Query: 867 PPPPPXPXXXXKXXGXXXXXXXXRPPPPPHPXXXXXG-------------PPPP--LPSX 1001
PPPPP K PPPPP P G PPPP PS
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 1002 XXXXPPXQXTXPXSSXP 1052
PP + S+ P
Sbjct: 373 GRQPPPLSSSRAVSNPP 389
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXG---PXXXXXXXTPPPPPPPXSXXXXXPPPPPL 997
P S PPPP P P + PP PPP P PPL
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL 406
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXX--APPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXP 1041
PP PPP A + PP PT PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 1042 P-PPRXXXXP 1068
P PP P
Sbjct: 448 PLPPSAPIAP 457
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 869 PPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPP-PPLXSXFXPPXXTXXPXL 1042
PPP P P + PP P P S PP PP P P L
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = +2
Query: 866 PPPP----PXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPP 994
PPPP P P P PPPPPPP PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 36.7 bits (81), Expect = 0.006
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +1
Query: 871 PPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PPPPP A P PPP + PPPP P P P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.010
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +2
Query: 863 SPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPPLXSXFXPPXXTXXP 1036
SPPPPP P P P PPP P PPPPP + PP P
Sbjct: 731 SPPPPP-PAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 35.5 bits (78), Expect = 0.013
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPP 1047
PPPPPP A AP P P PPPP PP P PPP
Sbjct: 732 PPPPPP--------AVIVPTPAPAPIPVPPPAPIMGGPPPPPPP--PGVAGAGPPPPPPP 781
Query: 1048 P 1050
P
Sbjct: 782 P 782
Score = 33.1 bits (72), Expect = 0.070
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 937 APPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
+PPPPP + P P P P P PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.65
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPP 958
P PPPP P GP PPPPPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGP--------PPPPPPP 782
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPP 958
P P PPP P P PPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 231 PKPVWXKXXPXXPRPPPXXXXPPXKPPXPPXXGGG 335
P P+ P P P PP PP PP G
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 229 PRNPFGXXPXPXXPXPPPXAGXPXXNPPXPPXXGGG 336
P P P P P P P PP PP G
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +1
Query: 259 PXXPXPPPX---AGXPXXNPPXPPXXGGG 336
P P PPP AG P PP P GG
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.023
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 938 PPPPPPPXSXXXXXPPPPP 994
PPPPPPP PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 32.3 bits (70), Expect = 0.12
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 938 PPPPPPPXSXXXXXPPPPP 994
PPPPPPP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPP 999
PPPPP PPPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 938 PPPPPPPXSXXXXXPPPPP 994
PPPPPP PPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 979 PPPPSPPFXXXPPXXNXPXXPPPP 1050
PPPP PP PP + P PPPP
Sbjct: 9 PPPPPPPPGFEPP--SQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.28
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 267 PRPPPXXXXPPXKPPXPPXXG 329
P PPP PP +PP PP G
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
Score = 29.9 bits (64), Expect = 0.65
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 982 PPPSPPFXXXPPXXNXPXXPPPP 1050
PP +PP PP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 253 PXPXXPXPPPXAGXPXXNPPXPPXXG 330
P P PPP P PP PP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPPF 1002
PPPPP PPPP P +
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGY 32
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPP 999
PPPPP PPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.053
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -1
Query: 320 GGXGGFXXGXPAXGGGXGXXGXGLXPNGFRGPP 222
GG GGF G GGG G G GL GF G P
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGL--GGFGGGP 258
Score = 33.1 bits (72), Expect = 0.070
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 335 PPPXXGGXGGFXXGXPAXGGGXGXXGXGLXPNGFRGP 225
P GG GGF G GGG G G G P G GP
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGG--PGGHGGP 271
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 334 PPPXXGGXGGFXGGXXXXGGGRGXXGXXXXQTGFGAPP 221
P GG GGF GG GGG G G GFG P
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPG--GFGGGP 265
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -2
Query: 349 GRXXXPPPXXGGXGGF--XGGXXXXGGGRGXXG 257
G PPP GG GGF GG GG G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG 227
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.092
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PPPPP + PPPPS P P P PPPP
Sbjct: 1707 PPPPPMSV-----PPPPSAP----PMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.65
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +2
Query: 863 SPPPPPXPXXQXXXXGPXXXXXXXTPPPPP--PPXSXXXXXPPPPPLXSXFXP 1015
+PP P P + PPPP PP PPPPL + P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPP 988
P PPPP P + PPPP P S P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 985 PPSPPFXXXPPXXNXPXXPPPPRXXXXP 1068
PP P PP + P PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 979 PPPPSPPFXXXPPXXNXPXXPPPPRXXXXP 1068
P PP PP PP P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 871 PPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSP 996
PPPPP A + PPPP L P P+P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP--LPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 942 PPPPHPXXXXXGPP--PPLPSXXXXXPPXQXTXPXSSXP 1052
P PP P PP PP+P+ PP P SS P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAP 1741
Score = 26.2 bits (55), Expect = 8.0
Identities = 17/68 (25%), Positives = 22/68 (32%)
Frame = +1
Query: 844 SPXXXXFXPPPPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXX 1023
+P PP P + A + PPPP+ PP PP P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP---PLPAS 1738
Query: 1024 NXPXXPPP 1047
+ P P P
Sbjct: 1739 SAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.12
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +2
Query: 863 SPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPPLXSXFXPPXXTXXPXL 1042
+PP P P P PPP P S PP+ S PP P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 1043 LXPXXXXXP 1069
P P
Sbjct: 183 SPPSAPSLP 191
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 942 PPPPHPXXXXXGPP--PPLPSXXXXXPPXQXTXPXSSXP 1052
PPP P PP P LPS PP P S P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 939 PPPPPHPXXXXXGPPPPL 992
PPPPP P P PPL
Sbjct: 6 PPPPPAPAPAAAAPAPPL 23
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 941 PPPPPPXSXXXXXPPPPPL 997
PPPPPP P PPL
Sbjct: 5 PPPPPPAPAPAAAAPAPPL 23
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 938 PPPPPPPXSXXXXXPPPP 991
PPPPPP + P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 8.0
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +1
Query: 874 PPPPXXTXXKXXAXXXXXXXXAPPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PPP + + PPP P PS P PP P PPPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP-SAVPPMP--PKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.49
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 319 GGXGGFXGGXXXXGGGRG 266
GG GGF GG GGGRG
Sbjct: 16 GGRGGFNGGRGGFGGGRG 33
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -1
Query: 1049 GGGGXXGXLXXGGXXXXGGEGGGGXXXXXXXVGGGGGAXXXXXXXXAXXFXXVXXGGGGG 870
G G G G GG GG G GG GGA GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 869 GXK 861
G K
Sbjct: 66 GAK 68
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -1
Query: 1067 GXXXXRGGGGXXGXLXXGGXXXXGGEGGGGXXXXXXXVGGGGGA 936
G RGG G G GG GGG GG GGA
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.9 bits (64), Expect = 0.65
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +2
Query: 935 TPPPPPP-PXSXXXXXPPPPPLXSXFXP 1015
TP PP P P PPPPP+ S P
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISP 755
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 939 PPPPPHPXXXXXGPPPPL-PSXXXXXPPXQXTXPXSSXP 1052
P P P P PPPP+ S PP T SS P
Sbjct: 732 PTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTP 770
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 938 PPPPPPPXSXXXXXPPPPPLXS 1003
P PPPP PPPPPL S
Sbjct: 942 PAFPPPP-------PPPPPLVS 956
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 935 TPPPPPP 955
TPPPPPP
Sbjct: 906 TPPPPPP 912
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPP 958
P SPPP P PPPPPPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXA-----PPPPPTXLXXXXXP--PPPSPPFXXXPP-XX 1023
PPPPPP A + P PPT P PP PP PP
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQST 251
Query: 1024 NXPXXPPPPR 1053
N P P R
Sbjct: 252 NTSQLPMPSR 261
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 946 PPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PPP+ PP + P P N P PPPP
Sbjct: 167 PPPSF-----QPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/57 (26%), Positives = 17/57 (29%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPPLXSXFXPP 1018
P PP P P P PP PP PP P+ + PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/72 (26%), Positives = 21/72 (29%), Gaps = 4/72 (5%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAPP-PPPTXLXXXXXPPPPSPPFXXXP---PXXNXPX 1035
PP P P AP PP PP P+P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 1036 XPPPPRXXXXPQ 1071
PPP P+
Sbjct: 1191 VPPPSEAPPVPK 1202
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/71 (26%), Positives = 19/71 (26%), Gaps = 4/71 (5%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAP----PPPPTXLXXXXXPPPPSPPFXXXPPXXNXPX 1035
PP P P AP PP P PPPS P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 1036 XPPPPRXXXXP 1068
PPP P
Sbjct: 1210 VPPPSTAPPVP 1220
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 948 PPHPXXXXXGPPPPLPSXXXXXPPXQXTXPXSSXP 1052
PP P PP PLPS P T P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP 1046
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +2
Query: 848 PXXXXSPPPPPXPXXQXXXXGPXXXXXXXTPPPPPPPXSXXXXXPPPPPLXSXFXPP 1018
P + PP P P P P PP PP P S PP
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 536 SPPXPLPPXXXXSXPXPTPLXPXPXP 613
+PP PLP P P+ P P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIP 1046
Score = 26.2 bits (55), Expect = 8.0
Identities = 19/73 (26%), Positives = 19/73 (26%), Gaps = 2/73 (2%)
Frame = +3
Query: 858 PFXPPPPPXPXXXXKXXGXXXXXXXXRPPP--PPHPXXXXXGPPPPLPSXXXXXPPXQXT 1031
P PPP P P P PP P PP P PS P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 1032 XPXSSXPXXXXSP 1070
P P P
Sbjct: 1120 APPVPKPSVAAPP 1132
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +1
Query: 868 PPPPPPXXTXXKXXAXXXXXXXXAPPP-PPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPP 1044
PP P P A AP PP PP P P PP PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS-VAVPPVPAPSGAPP 1122
Query: 1045 PPR 1053
P+
Sbjct: 1123 VPK 1125
Score = 26.2 bits (55), Expect = 8.0
Identities = 18/68 (26%), Positives = 19/68 (27%), Gaps = 3/68 (4%)
Frame = +3
Query: 858 PFXPPPPPXPXXXXKXXGXXXXXXXXRPPP---PPHPXXXXXGPPPPLPSXXXXXPPXQX 1028
P PP P P P P PP P PP P+PS P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV 1147
Query: 1029 TXPXSSXP 1052
P P
Sbjct: 1148 AAPPVPAP 1155
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 935 TPPPPPPPXSXXXXXPPPPPL 997
+PPPPPPP P PL
Sbjct: 369 SPPPPPPPPELLNHSPKSRPL 389
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = +2
Query: 935 TPPPPPPPXS-----XXXXXPPPPPLXSXFXPP 1018
T PPPPP S PPPP + + PP
Sbjct: 906 TLPPPPPTASMTASAPAIASPPPPKVGETYHPP 938
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPP 1044
PPPPPT P SPP PP PP
Sbjct: 908 PPPPPTASMTASAPAIASPP----PPKVGETYHPP 938
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Frame = +3
Query: 870 PPPPX---PXXXXKXXGXXXXXXXXRPPPPPHPXXXXXGPPPPL---PSXXXXXPP 1019
PPPP P PPPP H PPPP+ P PP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.8 bits (49), Expect(2) = 7.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 938 PPPPPPP 958
PPPPPPP
Sbjct: 1096 PPPPPPP 1102
Score = 20.6 bits (41), Expect(2) = 7.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 866 PPPPPXP 886
PPPPP P
Sbjct: 1095 PPPPPPP 1101
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 940 PPPPPTXLXXXXXPPPPSPPFXXXPPXXNXPXXPPPP 1050
PP P P PP+ P N P PP P
Sbjct: 667 PPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLP 703
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,048,015
Number of Sequences: 5004
Number of extensions: 38966
Number of successful extensions: 740
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 571756234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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