Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_E02
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB...   250   1e-66
AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p pro...   249   4e-66
AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA...   249   4e-66
AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p pro...    31   2.1  
AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p pro...    30   4.9  
AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein ( Dr...    30   4.9  
AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA ...    30   4.9  

>AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB,
           isoform B protein.
          Length = 330

 Score =  250 bits (613), Expect = 1e-66
 Identities = 122/249 (48%), Positives = 158/249 (63%)
 Frame = +2

Query: 116 NIIFPEAHQKSNMDSLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKL 295
           +I+    H  +   +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    
Sbjct: 32  SIVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PC 90

Query: 296 PLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGF 475
           P+L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGF
Sbjct: 91  PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 150

Query: 476 YLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNP 655
           Y+DA  EPW+ +Y+M SY+  EL D ++ A   VV P +            AL   L+NP
Sbjct: 151 YVDAKEEPWSKHYKMYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNP 208

Query: 656 GQYKSVSAFAAICNPSACPWGVKAFSGYLGEDKSKWAEWDATXLVXKYNGPPLTLLLXQG 835
           G Y+SVSAFA I NP+ CPWG KAF+GYLG +   WA WDAT LV +Y   P  L + QG
Sbjct: 209 GLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQG 268

Query: 836 SGDKFYLKK 862
           + D F   K
Sbjct: 269 AADNFLAGK 277


>AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p
           protein.
          Length = 286

 Score =  249 bits (609), Expect = 4e-66
 Identities = 120/235 (51%), Positives = 153/235 (65%)
 Frame = +2

Query: 158 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 337
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 338 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 517
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 518 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSAFAAICN 697
           M SY+  EL D ++ A   VV P +            AL   L+NPG Y+SVSAFA I N
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIAN 178

Query: 698 PSACPWGVKAFSGYLGEDKSKWAEWDATXLVXKYNGPPLTLLLXQGSGDKFYLKK 862
           P+ CPWG KAF+GYLG +   WA WDAT LV +Y   P  L + QG+ D F   K
Sbjct: 179 PTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGAADNFLAGK 233


>AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA,
           isoform A protein.
          Length = 286

 Score =  249 bits (609), Expect = 4e-66
 Identities = 120/235 (51%), Positives = 153/235 (65%)
 Frame = +2

Query: 158 SLQLESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 337
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 338 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 517
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 518 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSAFAAICN 697
           M SY+  EL D ++ A   VV P +            AL   L+NPG Y+SVSAFA I N
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIAN 178

Query: 698 PSACPWGVKAFSGYLGEDKSKWAEWDATXLVXKYNGPPLTLLLXQGSGDKFYLKK 862
           P+ CPWG KAF+GYLG +   WA WDAT LV +Y   P  L + QG+ D F   K
Sbjct: 179 PTECPWGKKAFAGYLGSNPDDWALWDATHLVSQYESTPQELFIDQGAADNFLAGK 233


>AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p
           protein.
          Length = 560

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 329 YKLDQTNNIEVVIS-HHPLLPEGGDR*KNSFCILIQMMHENTLFDNHQKFYWTILI 165
           Y+  QT  + V +   HPLL  GGD  ++ +      + + + F+  +KF + IL+
Sbjct: 427 YQQQQTTQLPVQLQLQHPLLQTGGDGKQSVYAPPTVQLRKQSRFNARKKFQFAILV 482


>AY069549-1|AAL39694.1|  434|Drosophila melanogaster LD27553p
           protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 590 Y*DLPHCKK----PSKLN-HIIQHSNNCPFCNYYSMVHLWRLNKNRH*LQNPMMNHLHQS 426
           Y + PHC K     ++L  HI    N CP+C      ++ + N  RH L+N +    H+ 
Sbjct: 196 YYNCPHCSKRFCSQTQLRTHITDLCNRCPYC---PRTYMQKSNLKRH-LRNHLSKPAHKC 251

Query: 425 *LHVAKYQDLRQLH---HVRLHTS 363
             H +K   +R+ H   H+R H S
Sbjct: 252 -FHCSK-AFMRKDHLKRHLRTHDS 273


>AF017096-1|AAC39085.1|  347|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 347

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 590 Y*DLPHCKK----PSKLN-HIIQHSNNCPFCNYYSMVHLWRLNKNRH*LQNPMMNHLHQS 426
           Y + PHC K     ++L  HI    N CP+C      ++ + N  RH L+N +    H+ 
Sbjct: 197 YYNCPHCSKRFCSQTQLRTHITDLCNRCPYC---PRTYMQKSNLKRH-LRNHLSKPAHKC 252

Query: 425 *LHVAKYQDLRQLH---HVRLHTS 363
             H +K   +R+ H   H+R H S
Sbjct: 253 -FHCSK-AFMRKDHLKRHLRTHDS 274


>AE014297-671|AAF54165.2|  434|Drosophila melanogaster CG2678-PA
           protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = -1

Query: 590 Y*DLPHCKK----PSKLN-HIIQHSNNCPFCNYYSMVHLWRLNKNRH*LQNPMMNHLHQS 426
           Y + PHC K     ++L  HI    N CP+C      ++ + N  RH L+N +    H+ 
Sbjct: 196 YYNCPHCSKRFCSQTQLRTHITDLCNRCPYC---PRTYMQKSNLKRH-LRNHLSKPAHKC 251

Query: 425 *LHVAKYQDLRQLH---HVRLHTS 363
             H +K   +R+ H   H+R H S
Sbjct: 252 -FHCSK-AFMRKDHLKRHLRTHDS 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,997,159
Number of Sequences: 53049
Number of extensions: 856150
Number of successful extensions: 1673
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)