Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E02
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical ... 231 5e-61
AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical... 231 5e-61
Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z36752-1|CAA85323.2| 150|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 28 7.7
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 28 7.7
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 28 7.7
>AL132847-5|CAB60384.2| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 231 bits (565), Expect = 5e-61
Identities = 111/229 (48%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
Frame = +2
Query: 167 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 346
L SSN+ F G Q VY HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+
Sbjct: 5 LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62
Query: 347 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 526
KSGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM
Sbjct: 63 EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122
Query: 527 YLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSAFAAICNPSA 706
Y+ EL + ++ + +D + AL LRN +++S+SAFA ICNP
Sbjct: 123 YIVKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPIT 181
Query: 707 CPWGVKAFSGYLG-EDKSKWAEWDATXLVXKYNGPPLTLLLXQGSGDKF 850
PWG KA +GYLG EDKS W ++DA+ ++ Y+GP +L+ QG+ D F
Sbjct: 182 VPWGQKALTGYLGDEDKSTWNQYDASEVLKAYSGPKREILVDQGAADNF 230
>AL110500-23|CAB63414.1| 280|Caenorhabditis elegans Hypothetical
protein Y48G10A.1 protein.
Length = 280
Score = 231 bits (565), Expect = 5e-61
Identities = 111/229 (48%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
Frame = +2
Query: 167 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 346
L SSN+ F G Q VY HASS +C+M F +Y+P D KLP L+YLSGLTC+ NF+
Sbjct: 5 LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62
Query: 347 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 526
KSGFQ++A++H ++VV PDTSPRGV +DGD SWDFG AGFY++AT E W NYRM
Sbjct: 63 EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122
Query: 527 YLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALXSTLRNPGQYKSVSAFAAICNPSA 706
Y+ EL + ++ + +D + AL LRN +++S+SAFA ICNP
Sbjct: 123 YIVKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPIT 181
Query: 707 CPWGVKAFSGYLG-EDKSKWAEWDATXLVXKYNGPPLTLLLXQGSGDKF 850
PWG KA +GYLG EDKS W ++DA+ ++ Y+GP +L+ QG+ D F
Sbjct: 182 VPWGQKALTGYLGDEDKSTWNQYDASEVLKAYSGPKREILVDQGAADNF 230
>Z49131-5|CAA88978.1| 217|Caenorhabditis elegans Hypothetical
protein ZC373.6 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 416 RGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNR 592
+G+ I G + +S G+ +T +P+N N+ V++ D + F V+ P R
Sbjct: 159 QGLDIHGGSGGYHRALSGGYLPPSTYDPYNVNWHSYGDEGVKMKDKAISVFRRVIAPGR 217
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 153 WTACN*NRPIKFLVVIKKCILMHHL 227
WT N N P K ++ + CI +HHL
Sbjct: 65 WTIPNENLPEKIILKLTSCINVHHL 89
>Z36752-1|CAA85323.2| 150|Caenorhabditis elegans Hypothetical
protein F35H8.1 protein.
Length = 150
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +2
Query: 308 YLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDA 487
YLS L C FI G +R A E +++ + + + +D ++ F VS F D
Sbjct: 3 YLSNLLCLTLTFIVCFGAERDADEEAYVLM--NLLKQSIDMDQTEALPGF-VSRDFTYDT 59
Query: 488 TNEPWNNNYRMGSYLNV 538
WN + M YL V
Sbjct: 60 CKGIWNRDKYM-EYLKV 75
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 515 CNYYSMVHLWRLNKNRH 465
CN+ + +H+WR N N H
Sbjct: 373 CNFLAGLHMWRTNPNHH 389
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 515 CNYYSMVHLWRLNKNRH 465
CN+ + +H+WR N N H
Sbjct: 439 CNFLAGLHMWRTNPNHH 455
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 515 CNYYSMVHLWRLNKNRH 465
CN+ + +H+WR N N H
Sbjct: 314 CNFLAGLHMWRTNPNHH 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,094,420
Number of Sequences: 27780
Number of extensions: 439328
Number of successful extensions: 997
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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