Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_E01
(1016 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 0.72
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 0.73
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.75
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.75
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.75
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.75
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 3.0
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 25 4.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 7.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 7.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 7.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 7.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.3
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 26.6 bits (56), Expect(2) = 0.72
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 884 PXPPXPTPPXXXXXXPAAXPPNXP 955
P PP P P PA+ PP P
Sbjct: 313 PPPPPPKPTIRPPPIPASPPPRPP 336
Score = 25.4 bits (53), Expect(2) = 5.7
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXP 640
P PP P + P + PPPP P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPP 318
Score = 23.8 bits (49), Expect(2) = 0.72
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 740 PPPRLXXPRAXPPXKXPXXAPPP 808
PPP L P + PP K PPP
Sbjct: 298 PPPPL--PLSNPPAKPTPPPPPP 318
Score = 21.8 bits (44), Expect(2) = 5.7
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAP 802
P PPP P PP P P
Sbjct: 320 PTIRPPPIPASPPPRPPASEPVGIP 344
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 26.6 bits (56), Expect(2) = 0.73
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +2
Query: 884 PXPPXPTPPXXXXXXPAAXPPNXP 955
P PP P P PA+ PP P
Sbjct: 91 PPPPPPKPTIRPPPIPASPPPRPP 114
Score = 25.4 bits (53), Expect(2) = 5.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXP 640
P PP P + P + PPPP P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPP 96
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 740 PPPRLXXPRAXPPXKXPXXAPPP 808
PPP L P + PP K PPP
Sbjct: 76 PPPPL--PLSNPPAKPTPPPPPP 96
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAP 802
P PPP P PP P P
Sbjct: 98 PTIRPPPIPASPPPRPPASEPVGIP 122
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/70 (24%), Positives = 20/70 (28%)
Frame = +2
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTPPXX 916
T PP P PP + P +P P P PP P PP
Sbjct: 464 TTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Query: 917 XXXXPAAXPP 946
+ PP
Sbjct: 524 ALEQEISGPP 533
Score = 23.4 bits (48), Expect(2) = 10.0
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPP 808
P PP R+ P P +PPP
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPP 498
Score = 23.0 bits (47), Expect(2) = 10.0
Identities = 12/38 (31%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Frame = +2
Query: 884 PXPPXPTPPXXXXXX--PAAXPPNXPXXXXRXXXQKPP 991
P PP P PP P PP P PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPP 533
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.75
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVX 736
P A PP P +G+ PPP P G R P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-- 289
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXS 814
PPPR P PP P +PP S
Sbjct: 290 -PPPRAGSP---PPPPPPRGSPPTGS 311
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXX-PPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRL 754
PP P G+ P R PPPP P G P P P +
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP---PRQKR 337
Query: 755 XXPRAXPPXKXPXXAPPP 808
P PP P PP
Sbjct: 338 QAPERSPPTGSPPTGSPP 355
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G+ P R PPP P G P P PPPR
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPP-----TGSPPP----PPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 758 XPRAXPPXKXPXXAPPP 808
P P +PPP
Sbjct: 307 PPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.75
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVX 736
P A PP P +G+ PPP P G R P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-- 310
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXS 814
PPPR P PP P +PP S
Sbjct: 311 -PPPRAGSP---PPPPPPRGSPPTGS 332
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXX-PPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRL 754
PP P G+ P R PPPP P G P P P +
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP---PRQKR 358
Query: 755 XXPRAXPPXKXPXXAPPP 808
P PP P PP
Sbjct: 359 QAPERSPPTGSPPTGSPP 376
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G+ P R PPP P G P P PPPR
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPP-----TGSPPP----PPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 758 XPRAXPPXKXPXXAPPP 808
P P +PPP
Sbjct: 328 PPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.75
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVX 736
P A PP P +G+ PPP P G R P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-- 295
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXS 814
PPPR P PP P +PP S
Sbjct: 296 -PPPRAGSP---PPPPPPRGSPPTGS 317
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/78 (26%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXX-PPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRL 754
PP P G+ P R PPPP P G P P P +
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP---PRQKR 343
Query: 755 XXPRAXPPXKXPXXAPPP 808
P PP P PP
Sbjct: 344 QAPERSPPTGSPPTGSPP 361
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G+ P R PPP P G P P PPPR
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPP-----TGSPPP----PPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 758 XPRAXPPXKXPXXAPPP 808
P P +PPP
Sbjct: 313 PPTGSLPPPQAGGSPPP 329
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.1 bits (57), Expect(2) = 3.0
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +2
Query: 728 PVXTPPPRLXXPR-AXPPXKXPXXAPPP 808
P+ PPP + P+ PP P PPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Score = 21.4 bits (43), Expect(2) = 3.0
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPP 634
PP P P PPPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPP 49
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPP 808
P T PP++ PR PP P PP
Sbjct: 382 PPTTEPPKIEPPRTEPPKTEPPPTEPP 408
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTP 907
P T PPR P+ PP P PP + PP TP
Sbjct: 367 PPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPP---------KTEPPKTTP 417
Query: 908 PXXXXXXPAAXPPNXP 955
P P PPN P
Sbjct: 418 P--KTEPPTTEPPNIP 431
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.0
Identities = 32/141 (22%), Positives = 35/141 (24%), Gaps = 3/141 (2%)
Frame = +2
Query: 578 PPXPGEG-AGXPXRXXP-PPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPP- 748
PP G +G + P PPP P P P PPP
Sbjct: 246 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
Query: 749 RLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTPPXXXXXX 928
R P P P PPP G P PP P P
Sbjct: 306 RTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 929 PAAXPPNXPXXXXRXXXQKPP 991
PP+ P PP
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPP 383
Score = 28.3 bits (60), Expect = 9.3
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVX 736
P PP P G P PPP P G R P P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPP-----PGMRYP---GGMPPPPPPRYPSAGPGM 362
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXS 814
PPP P A P PPP S
Sbjct: 363 YPPPPPSRPPAPPSGHGMIPPPPPPS 388
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTP 907
P+ PP P PP PPP G P PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG----GCPPPPPPPP 776
Query: 908 PXXXXXXPAAXPP 946
P P PP
Sbjct: 777 PGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G P PPPP P G G P P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 758 XPRAXPPXKXPXXAPP 805
P PP K P P
Sbjct: 800 IPDYLPPKKVPKVDGP 815
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTP 907
P+ PP P PP PPP G P PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG----GCPPPPPPPP 776
Query: 908 PXXXXXXPAAXPP 946
P P PP
Sbjct: 777 PGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G P PPPP P G G P P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 758 XPRAXPPXKXPXXAPP 805
P PP K P P
Sbjct: 800 IPDYLPPKKVPKVDGP 815
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.0
Identities = 32/141 (22%), Positives = 35/141 (24%), Gaps = 3/141 (2%)
Frame = +2
Query: 578 PPXPGEG-AGXPXRXXP-PPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPP- 748
PP G +G + P PPP P P P PPP
Sbjct: 256 PPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
Query: 749 RLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTPPXXXXXX 928
R P P P PPP G P PP P P
Sbjct: 316 RTPGPPGMPGMPPP---PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 929 PAAXPPNXPXXXXRXXXQKPP 991
PP+ P PP
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPP 393
Score = 28.3 bits (60), Expect = 9.3
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +2
Query: 557 PNAXXXXPPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVX 736
P PP P G P PPP P G R P P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPP-----PGMRYP---GGMPPPPPPRYPSAGPGM 372
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPPXS 814
PPP P A P PPP S
Sbjct: 373 YPPPPPSRPPAPPSGHGMIPPPPPPS 398
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTP 907
P+ PP P PP PPP G P PP P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG----GCPPPPPPPP 359
Query: 908 PXXXXXXPAAXPP 946
P P PP
Sbjct: 360 PGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXPXKXXXXXXXXXXXXXXXXPVXTPPPRLX 757
PP P G P PPPP P G G P P P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Query: 758 XPRAXPPXKXPXXAPP 805
P PP K P P
Sbjct: 383 IPDYLPPKKVPKVDGP 398
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 737 TPPPRLXXPRAXPPXKXPXXAPPP 808
T PP P PP + P +P P
Sbjct: 457 TTPPTTPKPAPPPPSRIPNPSPSP 480
Score = 23.0 bits (47), Expect(2) = 4.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 884 PXPPXPTPPXXXXXXPAAXPPNXP 955
P PP P PP P++ PP P
Sbjct: 489 PPPPPPLPP---IATPSSVPPPPP 509
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 728 PVXTPPPRLXXPRAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPTP 907
P PPPR+ PR PP P PP + P P P P
Sbjct: 138 PPPPPPPRV--PRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
Query: 908 P 910
P
Sbjct: 196 P 196
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPP 634
PP P GAG P PPPP
Sbjct: 237 PPLPPVGAGAPPPPPPPPP 255
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 7.0
Identities = 31/132 (23%), Positives = 35/132 (26%), Gaps = 1/132 (0%)
Frame = -3
Query: 1014 GRXGXXXXGGFWXXXRXXXXGXLGGXAAGXXXXXFGGVGXGGXGXPXXXXXXXXXXXXXX 835
G G GG + G +GG G +GG G GG
Sbjct: 118 GYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGG 177
Query: 834 XXXXXVXXXG-GGAXXGXFXGGXARGXXRRGGGVXTGXXXXXXXXXXXXXGXLLXGXRXP 658
G GG G + GG G GGG G G P
Sbjct: 178 GGDGGYGGGGFGGGGMGGYGGGMGGGGY--GGGGMGGGGYGGGGDGGYGPSGGYGGGYGP 235
Query: 657 XXXPVXGFGGGG 622
G GGGG
Sbjct: 236 GGGYGMGGGGGG 247
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPP 634
PP P GAG P PPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPP 634
PP P GAG P PPPP
Sbjct: 223 PPLPPVGAGAPPPPPPPPP 241
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +2
Query: 737 TPPPRLXXP----RAXPPXKXPXXAPPPXSXTXXXXXXXXXXXXXXXXXXXGXPXPPXPT 904
TPPP P R P APPP S P PP P
Sbjct: 510 TPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGT----NVPIPPPPP 565
Query: 905 PPXXXXXXPAAXPPNXPXXXXRXXXQKPP 991
PP A PP P PP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 631 GGRXGSXGGSXALPGXXGXXXXXVWXPPPPP 539
GG GS GG G G PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 631 GGRXGSXGGSXALPGXXGXXXXXVWXPPPPP 539
GG GS GG G G PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 578 PPXPGEGAGXPXRXXPPPPXPXTGXXXGXRXP 673
PP P G P R P PP P T G P
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 740 PPPRLXXPRAXPPXKXPXXAPPPXS 814
PPPRL P PP P PPP S
Sbjct: 1592 PPPRLGMPPPGPP--PPNGGPPPPS 1614
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.137 0.459
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,326,176
Number of Sequences: 27780
Number of extensions: 148740
Number of successful extensions: 1058
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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