Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D23
(945 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 33 2.0
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 33 2.0
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 33 2.0
AF353674-1|AAK39520.1| 475|Homo sapiens BTB domain protein prot... 32 2.6
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 31 6.1
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 31 6.1
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 31 8.1
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 31 8.1
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 31 8.1
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 31 8.1
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 31 8.1
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 31 8.1
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 31 8.1
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 31 8.1
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 31 8.1
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 32.7 bits (71), Expect = 2.0
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Frame = +1
Query: 592 PVSQRPAKGRXPXXGPVVXLXP*APPPLTXXSKXDSQGXRCXXPTWTXX---NSLPFPPX 762
P PA P + P +PP + K P + +SL FPP
Sbjct: 871 PPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPP 930
Query: 763 XPPXCPXLXGPXPXTGXLSALSPFXXAWPLSHTSRXXXPXSGXXPPPT 906
P P P P T ++ +P P TS+ P G PPPT
Sbjct: 931 PPSPVPAPPPPPPPT---ASPTPDKSGSPGKKTSKTSSP-GGKKPPPT 974
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 32.7 bits (71), Expect = 2.0
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Frame = +1
Query: 592 PVSQRPAKGRXPXXGPVVXLXP*APPPLTXXSKXDSQGXRCXXPTWTXX---NSLPFPPX 762
P PA P + P +PP + K P + +SL FPP
Sbjct: 871 PPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPP 930
Query: 763 XPPXCPXLXGPXPXTGXLSALSPFXXAWPLSHTSRXXXPXSGXXPPPT 906
P P P P T ++ +P P TS+ P G PPPT
Sbjct: 931 PPSPVPAPPPPPPPT---ASPTPDKSGSPGKKTSKTSSP-GGKKPPPT 974
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 32.7 bits (71), Expect = 2.0
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Frame = +1
Query: 592 PVSQRPAKGRXPXXGPVVXLXP*APPPLTXXSKXDSQGXRCXXPTWTXX---NSLPFPPX 762
P PA P + P +PP + K P + +SL FPP
Sbjct: 857 PPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPP 916
Query: 763 XPPXCPXLXGPXPXTGXLSALSPFXXAWPLSHTSRXXXPXSGXXPPPT 906
P P P P T ++ +P P TS+ P G PPPT
Sbjct: 917 PPSPVPAPPPPPPPT---ASPTPDKSGSPGKKTSKTSSP-GGKKPPPT 960
>AF353674-1|AAK39520.1| 475|Homo sapiens BTB domain protein
protein.
Length = 475
Score = 32.3 bits (70), Expect = 2.6
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 604 RPAKGRXPXXGPVVXLXP*AP-PPLTXXSKXDSQGXRCXXPTWTXXNSLPFPPXXPPXCP 780
R A R P P P AP PP + +S G RC PT N+L F
Sbjct: 17 RKAGPRSPPSAPAPAPPPPAPAPPTLGNNHQESPGWRCCRPTLRERNALMFNNELMADVH 76
Query: 781 XLXGPXPXTGXLSA 822
+ GP T + A
Sbjct: 77 FVVGPPGATRTVPA 90
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 31.1 bits (67), Expect = 6.1
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +3
Query: 711 VPXPHLDXXKFLAVSPXXXPPXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
VP P + P PP +P PV P P P P LP S
Sbjct: 383 VPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLP-PPSLSST 441
Query: 891 XPPPXLXLXP 920
PPP + L P
Sbjct: 442 APPPVMPLPP 451
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 31.1 bits (67), Expect = 6.1
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = +3
Query: 711 VPXPHLDXXKFLAVSPXXXPPXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
VP P + P PP +P PV P P P P LP S
Sbjct: 181 VPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLP-PPSLSST 239
Query: 891 XPPPXLXLXP 920
PPP + L P
Sbjct: 240 APPPVMPLPP 249
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 189 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 247
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 248 NPPPVAPL 255
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 30.7 bits (66), Expect = 8.1
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Frame = +3
Query: 714 PXPHLDXXKFLAVSPXXXP-PXPLPVRTLXXYXXPVRPFPLXGXVAPFPYLPXXXSXFXV 890
P P + L P P P P PV TL PV P P V P LP +
Sbjct: 209 PIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVP-PVPPIPPVPSVPPMTPLPPMSGMPPL 267
Query: 891 XPPPXLXL 914
PPP L
Sbjct: 268 NPPPVAPL 275
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,258,180
Number of Sequences: 237096
Number of extensions: 1555112
Number of successful extensions: 2853
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2800
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -