Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D21
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl prote... 61 1e-09
AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl pro... 61 1e-09
AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical ... 31 1.5
AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical ... 31 1.5
AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical ... 31 1.5
U40941-7|AAA81712.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.0
>U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl protein
thioesteraseprotein 1 protein.
Length = 270
Score = 60.9 bits (141), Expect = 1e-09
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Frame = +3
Query: 243 SMEIIKHRIEEKHPGTVVYNVNRFESWSS-LESMWHQVLEIGLDVANISASH-PE---GI 407
SM +K EE+ PG V+++ S + +E ++ + +A I + PE G
Sbjct: 14 SMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKNDPELKNGY 73
Query: 408 NLIGYSQGGLVARGIVETFSNVSVSTFISLSSPQAGQYGAGFL---HLVFPGLVKETVYE 578
N IG+SQG R + + N + +S+ G +GA + +++ G+ +
Sbjct: 74 NAIGFSQGAQFLRAVAQRCPNPPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGVRRLIDLG 133
Query: 579 LFYSKVGQHTSVGNYWNDPYHQPLYETYCMFLPYLNNHKQSKKSEEFKANMLRLKRLVLI 758
+ V + YW+DP Y+ +FL +NN ++ + +K N+L LK LVL+
Sbjct: 134 AYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINN--ENNNNPTYKRNLLSLKNLVLV 191
Query: 759 GGPDDDVITP 788
D ++ P
Sbjct: 192 KFNQDHMVVP 201
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +1
Query: 787 PGQSSQFGYYNANE--TVIELRNQEIYKDDKIGLK 885
P SS FG+Y + T++ + ++YK+D+IGLK
Sbjct: 201 PKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLK 235
>AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl
protein thioesterase protein.
Length = 254
Score = 60.9 bits (141), Expect = 1e-09
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 8/190 (4%)
Frame = +3
Query: 243 SMEIIKHRIEEKHPGTVVYNVNRFESWSS-LESMWHQVLEIGLDVANISASH-PE---GI 407
SM +K EE+ PG V+++ S + +E ++ + +A I + PE G
Sbjct: 14 SMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKNDPELKNGY 73
Query: 408 NLIGYSQGGLVARGIVETFSNVSVSTFISLSSPQAGQYGAGFL---HLVFPGLVKETVYE 578
N IG+SQG R + + N + +S+ G +GA + +++ G+ +
Sbjct: 74 NAIGFSQGAQFLRAVAQRCPNPPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGVRRLIDLG 133
Query: 579 LFYSKVGQHTSVGNYWNDPYHQPLYETYCMFLPYLNNHKQSKKSEEFKANMLRLKRLVLI 758
+ V + YW+DP Y+ +FL +NN ++ + +K N+L LK LVL+
Sbjct: 134 AYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINN--ENNNNPTYKRNLLSLKNLVLV 191
Query: 759 GGPDDDVITP 788
D ++ P
Sbjct: 192 KFNQDHMVVP 201
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 787 PGQSSQFGYYNANE--TVIELRNQEIYKDDKIGLK 885
P S FG+Y + T++ + ++YK+D+IGLK
Sbjct: 201 PKDSXWFGFYKDGDIDTILPMNETDLYKEDRIGLK 235
>AF002196-3|AAP68957.1| 916|Caenorhabditis elegans Hypothetical
protein C09D4.4c protein.
Length = 916
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 300 NVNRFESWSSLESMWHQVLEIGLDVANISASHPEGINLIGYSQGGLVARGIVETFSNVSV 479
+ NR ++W+ + +M H +L + + + + I+ + +S GG++ R V V +
Sbjct: 682 SANRSQTWADITTMAHNLLSEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEM 741
Query: 480 S-------TFISLSSPQAG 515
T ++++SP G
Sbjct: 742 QWMIDRCYTLMTINSPHLG 760
>AF002196-2|AAP68956.1| 915|Caenorhabditis elegans Hypothetical
protein C09D4.4b protein.
Length = 915
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 300 NVNRFESWSSLESMWHQVLEIGLDVANISASHPEGINLIGYSQGGLVARGIVETFSNVSV 479
+ NR ++W+ + +M H +L + + + + I+ + +S GG++ R V V +
Sbjct: 681 SANRSQTWADITTMAHNLLSEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEM 740
Query: 480 S-------TFISLSSPQAG 515
T ++++SP G
Sbjct: 741 QWMIDRCYTLMTINSPHLG 759
>AF002196-1|AAP68955.1| 913|Caenorhabditis elegans Hypothetical
protein C09D4.4a protein.
Length = 913
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 300 NVNRFESWSSLESMWHQVLEIGLDVANISASHPEGINLIGYSQGGLVARGIVETFSNVSV 479
+ NR ++W+ + +M H +L + + + + I+ + +S GG++ R V V +
Sbjct: 679 SANRSQTWADITTMAHNLLSEVREYVEEARNDIQRISFLAHSLGGVIVRSAVGLAPEVEM 738
Query: 480 S-------TFISLSSPQAG 515
T ++++SP G
Sbjct: 739 QWMIDRCYTLMTINSPHLG 757
>U40941-7|AAA81712.1| 312|Caenorhabditis elegans Hypothetical
protein F35C8.8 protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = +3
Query: 372 VANISASHPEGINLIGYSQGGLVARGIVETFSNVSVSTFISLSSPQAGQYGAGFLHLVFP 551
VAN PEG+ L + GG G++ F S ST + L + + H +
Sbjct: 116 VANPPHGQPEGVQLASFFGGGGKIEGVI-VFMYFSSSTLLLLHTL---SLSFSWCHFIIS 171
Query: 552 GLVKETVYELFYSKVGQHTSV 614
G + ++ F+ +T V
Sbjct: 172 GSCGKLTFDFFFLLKSNYTVV 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,315,820
Number of Sequences: 27780
Number of extensions: 387426
Number of successful extensions: 1297
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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