Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_D18
         (969 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820...    30   3.2  
01_05_0166 + 18844468-18845184,18847394-18847690                       30   3.2  
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744...    29   5.6  
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540     29   5.6  
08_01_0413 - 3679887-3681254                                           28   9.7  

>02_05_0300 +
           27681204-27681656,27681745-27681840,27681933-27682022,
           27682126-27682227,27682310-27682456,27683608-27683748,
           27683749-27683808,27685133-27685230,27685308-27685410,
           27685954-27686037
          Length = 457

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 449 IP*RPCRYFFCGPCFY 402
           +P RPCRYF  G C Y
Sbjct: 109 VPDRPCRYFLAGDCSY 124


>01_05_0166 + 18844468-18845184,18847394-18847690
          Length = 337

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 658 VANEYDPMWPNDYEKVAKELQAKRLSQMTEETGX*ERRXVGDDETYSEK 804
           V  EYDP  PNDYE   K+ + KR  +  E     ERR   ++E   E+
Sbjct: 61  VMEEYDPARPNDYEDYRKD-KLKRAKE-AEVRKELERRRREEEERERER 107


>09_04_0548 -
           18469636-18470037,18471164-18472705,18474052-18474474,
           18474874-18474999
          Length = 830

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 649 DWNVANEYDPMWPNDYEKVAKELQAKRLSQMTEE 750
           +WNV N+  P+W    E++ KE  A     +T +
Sbjct: 259 EWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTND 292


>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
          Length = 699

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 649 DWNVANEYDPMWPNDYEKVAKELQAKRLSQMTEE 750
           +WNV N+  P+W    E++ KE  A     +T +
Sbjct: 259 EWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTND 292


>08_01_0413 - 3679887-3681254
          Length = 455

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -2

Query: 500 GCVTAAFFSCN-CDCSNLIP*-RPCRYFFCGPCFYR 399
           GC     F CN C  S   P   PC + FC PC Y+
Sbjct: 232 GCGCNGSFECNICFESAKDPVVTPCGHLFCWPCIYQ 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,406,947
Number of Sequences: 37544
Number of extensions: 292645
Number of successful extensions: 609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)