Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D15
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 289 2e-78
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 289 2e-78
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 289 2e-78
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 32 0.49
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 32 0.49
AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical... 29 3.4
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.4
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 4.5
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 289 bits (708), Expect = 2e-78
Identities = 145/234 (61%), Positives = 171/234 (73%), Gaps = 3/234 (1%)
Frame = +2
Query: 197 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 376
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 377 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 556
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 557 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFRERTFKSSCNQR*R 736
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM + K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 737 FSNKKQFDTVW-M*GVLLDGIKXQQTX*LPGS-CVLAGYGDV-XXDAPSVKVXG 889
K +FD ++ + L DGIK L G V+AGYGDV A S+K G
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFG 238
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 289 bits (708), Expect = 2e-78
Identities = 145/234 (61%), Positives = 171/234 (73%), Gaps = 3/234 (1%)
Frame = +2
Query: 197 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 376
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 377 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 556
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 557 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFRERTFKSSCNQR*R 736
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM + K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 737 FSNKKQFDTVW-M*GVLLDGIKXQQTX*LPGS-CVLAGYGDV-XXDAPSVKVXG 889
K +FD ++ + L DGIK L G V+AGYGDV A S+K G
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFG 238
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 289 bits (708), Expect = 2e-78
Identities = 145/234 (61%), Positives = 171/234 (73%), Gaps = 3/234 (1%)
Frame = +2
Query: 197 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 376
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 377 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 556
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 557 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFRERTFKSSCNQR*R 736
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM + K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 737 FSNKKQFDTVW-M*GVLLDGIKXQQTX*LPGS-CVLAGYGDV-XXDAPSVKVXG 889
K +FD ++ + L DGIK L G V+AGYGDV A S+K G
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFG 238
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 581 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFRERTFKSSCNQR*RFSNKKQFD 760
DG T +++ + D+ K + +E T G+ NLY M R S+C R + F+
Sbjct: 403 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVRYAADSSTCR---RVKLAEHFE 458
Query: 761 TVW 769
W
Sbjct: 459 EAW 461
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 581 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFRERTFKSSCNQR*RFSNKKQFD 760
DG T +++ + D+ K + +E T G+ NLY M R S+C R + F+
Sbjct: 426 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVRYAADSSTCR---RVKLAEHFE 481
Query: 761 TVW 769
W
Sbjct: 482 EAW 484
>AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical
protein Y71H2AM.3 protein.
Length = 483
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +3
Query: 675 IICIKC-----SEKGLLKVPAINVNDSVTKSNSTLYGCRESCSTESXGNRHXDCR 824
IIC +C SE+ ++ + + +D + + S + CR+SC +RH + +
Sbjct: 202 IICARCKQLILSEEYIMTIQCLPDDDFLATTQSADFFCRDSCGASCDPDRHKNVK 256
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 460 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 302
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 620 PDLLKDVKGITEETTTGVHNL 682
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,851,231
Number of Sequences: 27780
Number of extensions: 423759
Number of successful extensions: 982
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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