Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_D15
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   5.0  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 848 HNLPIHNFPAIXMSVAX*FRRARLPTSIQCRIA 750
           H L IH  P + ++     +R +   +I+C +A
Sbjct: 394 HVLTIHTIPEVKVTPRFQAKRLKEEANIRCHVA 426


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 382 LNKNRCLYCHV 350
           +N+NRC YC +
Sbjct: 66  INRNRCQYCRL 76


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 382 LNKNRCLYCHV 350
           +N+NRC YC +
Sbjct: 115 INRNRCQYCRL 125


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 660 LQPGYIICIKCSEKG 704
           LQPG  + +KCS  G
Sbjct: 433 LQPGPAVSLKCSAAG 447


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 660 LQPGYIICIKCSEKG 704
           LQPG  + +KCS  G
Sbjct: 433 LQPGPAVSLKCSAAG 447


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,237
Number of Sequences: 438
Number of extensions: 5468
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)