Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D14
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0228 - 13278085-13278264,13278405-13278493,13278613-13278736 30 2.3
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 30 3.0
01_06_0944 + 33211652-33212427,33212492-33212660,33212825-332129... 30 3.0
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799... 29 4.0
05_01_0133 + 895107-895280,895960-896271,896815-897081,897161-89... 29 7.0
02_01_0502 - 3659564-3659660,3659923-3660061,3660161-3660238,366... 29 7.0
11_06_0372 + 22781438-22781977 28 9.2
01_04_0047 - 15408802-15409068,15409418-15409478,15409516-154096... 28 9.2
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 9.2
>06_02_0228 - 13278085-13278264,13278405-13278493,13278613-13278736
Length = 130
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 188 LETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLL-KKV 364
++T LR E W ++E+ +PV D E+D+ ++ L K D Q K++
Sbjct: 2 VQTQTLRAEAWKAIKEEKRPVVYTLDEPEKDDRNNLSLSQGNLANDKARVDLMQNRGKRL 61
Query: 365 RRKVARQLSDK 397
+ +QL +K
Sbjct: 62 EAALTKQLDEK 72
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 227 LEEDWKPVDLDE-DRTEEDNEPAMTTMLSALDLKKT 331
LEE+ KP +++E DR EE+N+P +T S ++T
Sbjct: 875 LEENHKPQEVNEGDREEENNQPGASTGQSGQQQQQT 910
>01_06_0944 +
33211652-33212427,33212492-33212660,33212825-33212936,
33213061-33213159,33213237-33213394,33214911-33215062,
33215162-33215249,33215399-33215476,33215516-33215690,
33216701-33217002
Length = 702
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 170 GTKLLDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTT 334
G LL++ L + +W +L + E + N P MT ++SALD + TT
Sbjct: 512 GVLLLEIAWELWKEGRWSELADPSIYNACPEHKESPINRPTMTEIISALDNESTT 566
>02_02_0220 -
7992124-7992351,7992458-7992562,7993499-7993711,
7993937-7994196,7994425-7994701,7995226-7995371,
7995519-7995903,7996680-7996964
Length = 632
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 203 LRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKV 364
+ +EQW KL + W + + +D+EP + L KT S + K +
Sbjct: 504 MTDEQWTKLVDMWSSPEHKKQEKYKDSEPTAIDLFKELHCSKTKGFSEPVKKAI 557
>05_01_0133 +
895107-895280,895960-896271,896815-897081,897161-897265
Length = 285
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 353 LKKVRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDI 532
+KK R LSD +D R Q A+D +NG+I+S + + EI++
Sbjct: 69 IKKRGRASLVDLSDILGVDLYHVERQSQKVVADDPSLMLINGEIMSQSYWDTVTEEINEK 128
Query: 533 FKSIDRLASA 562
+ ++A A
Sbjct: 129 LQERSQIALA 138
>02_01_0502 -
3659564-3659660,3659923-3660061,3660161-3660238,
3660486-3660654,3660757-3660873,3660956-3661102,
3661203-3661388,3661472-3661720,3662196-3662432,
3662511-3662673,3662748-3662866,3662976-3663068,
3663595-3663735,3663813-3663896,3663974-3664084,
3664162-3664260,3664501-3664623,3664908-3664958,
3665152-3665275,3665357-3665514,3665595-3665709,
3665931-3666060,3666163-3666328,3667047-3667136,
3667650-3667857,3668270-3668439,3668542-3668577
Length = 1199
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 197 ILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKV 376
I+ R E K+ + P ++ R E+N + ML+ L L + Q + KV + +
Sbjct: 386 IVSRPEMLSKMYLEACPKLIERFREREENVKSTEPMLAILLLFSPRWLLKQEVPKVVKSI 445
Query: 377 ARQLSDKSI 403
RQL +KSI
Sbjct: 446 NRQLREKSI 454
>11_06_0372 + 22781438-22781977
Length = 179
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 209 NEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 325
NE W KL + D D D EED+E +L+A+ L+
Sbjct: 141 NEAWAKLRDGLPLSDSDSDADEEDDED--MALLAAMGLE 177
>01_04_0047 -
15408802-15409068,15409418-15409478,15409516-15409626,
15409707-15409958,15410044-15410270,15410971-15411230,
15411373-15412279,15412370-15412567
Length = 760
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 144 DVNVSTLEW--VQNY*TWKPSCSVTSNG*NSKKTGSRWTWMKT 266
D N+ TL W +Q Y + P V KK G RW K+
Sbjct: 169 DDNIKTLLWNELQKYFVFPPGSQVRGRDYTLKKMGDRWRQWKS 211
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 176 KLLDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPA--MTTMLSALDLKKTTFDSAQ 349
+L+ +ET+ + +KL D+ D +E NEP+ M + +DL+ TF +
Sbjct: 4374 ELISIETLDCEQSEGVKLARDFSKSDWMIIEAKEYNEPSTQMDVEVETVDLEDETFHVGE 4433
Query: 350 L 352
L
Sbjct: 4434 L 4434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,245,438
Number of Sequences: 37544
Number of extensions: 328412
Number of successful extensions: 911
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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