Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D10
(921 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 35 0.079
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 33 0.24
03_05_1054 + 29992101-29993032,29995378-29995401,29996790-29997423 33 0.32
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 33 0.42
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 32 0.56
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.3
04_01_0180 + 2034021-2034023,2034741-2035088 31 1.7
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 31 1.7
03_01_0476 - 3660327-3661261,3661401-3661668 30 2.3
02_04_0315 - 21969416-21970756 29 3.9
06_03_0064 + 16134243-16134881 29 5.2
04_01_0290 + 3843610-3843712,3844088-3846003 29 5.2
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 6.9
01_01_0473 - 3478660-3480338,3480507-3480609 29 6.9
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 35.1 bits (77), Expect = 0.079
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +2
Query: 371 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAXKV 550
DA G+ EA+E + E+L A+PDV+ L E L+ A + ++++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL---- 692
Query: 551 SSNVQETNEKLAPKIKAAYD 610
N+ ETN K A YD
Sbjct: 693 -ENLLETNPYTVTKRVAKYD 711
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 33.5 bits (73), Expect = 0.24
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +2
Query: 401 EQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAXKVSSNVQETNE 577
+QS ERT E + KAH ++ K E +QAA +QE Q VQ T
Sbjct: 420 KQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQEEQFPMSLADQKVQAT-- 477
Query: 578 KLAPKIKAAYDDFAKNTQGGDQEDPGGRQRQA-VSVDIELSHLINIS 715
A + KN QG D+ G + Q + D + + IN S
Sbjct: 478 --GVNFDAQENVGEKNLQGSDKNTEGEAKIQGEPAKDYDTTPSINFS 522
>03_05_1054 + 29992101-29993032,29995378-29995401,29996790-29997423
Length = 529
Score = 33.1 bits (72), Expect = 0.32
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 58 LCCSPVRISSALSLSTVHH-------GRQV-RSSLRLHRVWPKVAMVRRDAPDFFKDIEH 213
LC + L+TVH R+V RS L LH+V+ +A+V + DIE
Sbjct: 197 LCAAVAEHGKGAVLATVHEIQDRHDAAREVERSLLELHQVFLDMAVVVESQGEQLDDIER 256
Query: 214 HTKEFHKTLEQQFNSLTKSKDAQDFSKAW 300
H ++ L K+++ Q S+ W
Sbjct: 257 HVNSATTYVQGGNKELRKAREHQRSSRKW 285
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 362 ALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 541
A+ DA G+ +A+E ++ E+L A+PDVE L E L+ A ++ ++ + L
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSLE 574
Query: 542 XKVSSNVQETNE 577
+N Q +
Sbjct: 575 NLFVTNSQRVKK 586
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 431 PCARCSASTVPKPXWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 273
P R SA T+ WP L A+ +R L AL+CC + S PS L++C S
Sbjct: 99 PGLRASAPTL---RWPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Frame = +2
Query: 380 GKAXEALEQSRQNIERTAEELRKAHPDV---------EKNATALR-EKLQAAVQNTVQES 529
G E Q N++ E L A D+ EKNA L+ ++L+A ++N E
Sbjct: 795 GNKLEEQNQQISNLQEAVENLEAAKTDMYNELTVCQEEKNAALLQVQQLEANLKNLESEL 854
Query: 530 QKLAXKVSSNVQETNEKLAPKIKA 601
++ +VS+ +++ NE+L KI +
Sbjct: 855 EQKQSQVSA-LEQANEELREKISS 877
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 392 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 514
EALE+ QN+ R EE +K H +++K L K L AA +N
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 383 KAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ-AAVQ--NTVQESQKLAXKVS 553
+ +AL + +ER AEE R AH + A +L+ AV+ N + Q+ A + S
Sbjct: 397 RVIQALREELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSS 456
Query: 554 SNVQETNEKLA 586
S E K+A
Sbjct: 457 SRAMELEHKVA 467
>03_01_0476 - 3660327-3661261,3661401-3661668
Length = 400
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/108 (15%), Positives = 45/108 (41%)
Frame = +2
Query: 353 SRGALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 532
++GA G+A +A +A ++++ E E + H ++ + E + ++
Sbjct: 128 AKGAAGEATRRAEQAKHKTKEAAEAAGERGAEVHEQSKQGKAKVEETAKEKAGEGYDAAK 187
Query: 533 KLAXKVSSNVQETNEKLAPKIKAAYDDFAKNTQGGDQEDPGGRQRQAV 676
A K ++++ + K A + ++T D G+ ++ +
Sbjct: 188 DKAGKAQETLRQSTDAAKDKAGKAQETLRQSTDAA--RDKAGKAQETL 233
>02_04_0315 - 21969416-21970756
Length = 446
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 371 DANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKL---A 541
D NG ALE++ + + E L A + K A+ EK ++A++ QE++ L
Sbjct: 246 DENGSLRRALERAVEEVNAANESLELATGENSKLQDAVAEK-ESAMEALRQENESLKASE 304
Query: 542 XKVSSNVQETNEKLAPKIKAA 604
+ +E + +LA KAA
Sbjct: 305 AEARGRAKELDGQLAAARKAA 325
>06_03_0064 + 16134243-16134881
Length = 212
Score = 29.1 bits (62), Expect = 5.2
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = +2
Query: 449 AHPDVEKNATALREKLQAAVQNTVQESQKLAXKVSSNVQETNEKLAPKIKAAYDDFAKNT 628
AH D EK ++ AAV V S+ V +V E KL +K A
Sbjct: 80 AHADAEKGFGVMQNPAAAAVMRPVPSSRATVHDVDDDVFEI--KLCAPVK---PPTAAGR 134
Query: 629 QGGDQEDPGG 658
QGG D GG
Sbjct: 135 QGGSGGDGGG 144
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 29.1 bits (62), Expect = 5.2
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Frame = +2
Query: 347 RVSRGALGDANGKAXEALEQSRQNIERTAEELR------KAHPDV-EKNATALREKLQAA 505
++ GAL +AN A +A + + I + E+L+ K + D+ E LR +L +A
Sbjct: 201 KMELGALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTNKDLAESENGKLRSELLSA 260
Query: 506 VQNTVQESQ--KLAXKVSSNVQETNEKLAPKIKAAYDDFAKNT 628
+ Q K +V V E E A A +D K +
Sbjct: 261 EEKYSQSEAEVKYLKQVMGAVVEAKEAAAKAFAAEKEDIMKES 303
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 359 GALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 499
G GD G+ A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 359 GALGDANGKAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-QK 535
G D + K + S + +ELR+ + D + AL E++ A +++ +QE+ +K
Sbjct: 150 GGSSDISKKGSDGSSSSSSESDSEVDELREDNGD--GSPFALNERI-AELEDELQEAREK 206
Query: 536 LAXKVSSNVQETNEKLAPKIKAAYDDFA 619
L N + EKL K+K ++ + +
Sbjct: 207 LEALEEKNTRCQCEKLEEKLKDSHSEIS 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,411,895
Number of Sequences: 37544
Number of extensions: 293607
Number of successful extensions: 1155
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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