Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_D08
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 24 2.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 3.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 3.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 8.4
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -3
Query: 350 IRFTFKSLDAFPANSKTSAVRYSKIAAE*TAAVAPTRPW 234
I+FT + FP N+ + +S + E A PW
Sbjct: 90 IKFTTRDCSLFPGNALSCKETFSLLYYEFDVATKEPPPW 128
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 410 FMRLSNSSSPLIASCKCRGVIRFTFKSLDAFPANS 306
FMR+ N ++ G ++F L FP+NS
Sbjct: 276 FMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNS 310
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 410 FMRLSNSSSPLIASCKCRGVIRFTFKSLDAFPANS 306
FMR+ N ++ G ++F L FP+NS
Sbjct: 244 FMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNS 278
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 110 PPILKRVPHYHNYKRENNSRQKSQILRIPY 21
P I+ + + +NY NN+ K I Y
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 110 PPILKRVPHYHNYKRENNSRQKSQILRIPY 21
P I+ + + +NY NN+ K I Y
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 110 PPILKRVPHYHNYKRENNSRQKSQILRIPY 21
P I+ + + +NY NN+ K I Y
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 110 PPILKRVPHYHNYKRENNSRQKSQILRIPY 21
P I+ + + +NY NN+ K I Y
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 110 PPILKRVPHYHNYKRENNSRQKSQILRIPY 21
P I+ + + +NY NN+ K I Y
Sbjct: 79 PKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 677 ISITYSYICSPDQQFQSH 624
I+ TYS SPD QF ++
Sbjct: 474 INFTYSLALSPDGQFGNY 491
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 683 LHISITYSYICSPDQQFQSHHCP 615
LH+ +T SP Q Q+ CP
Sbjct: 671 LHLHLTSPPARSPSSQAQASQCP 693
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 8.4
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 440 HTYTNLSLERKAVLVHPFNFKL*DDKIILHLIPAVVTHLHKSSPRLVNIVFY*NN 604
H YTNL+ RK ++ NF + +I+ + AVV + + L+ I F NN
Sbjct: 463 HLYTNLTALRKRDVLKKGNFTI---EILNKTVLAVVRQSEEEAVSLL-INFSKNN 513
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,668
Number of Sequences: 438
Number of extensions: 5491
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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