Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_D04
         (920 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   7.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 452 WLLPVAISRVLPGWTQD 402
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 452 WLLPVAISRVLPGWTQD 402
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 452 WLLPVAISRVLPGWTQD 402
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 452 WLLPVAISRVLPGWTQD 402
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 432 YRHWQQPL 455
           YRHWQ PL
Sbjct: 344 YRHWQIPL 351


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 321 VGRSLQAGLCARTPRFSPTAAPYPV 395
           V  ++Q   C RT   +  A+PYP+
Sbjct: 246 VTATVQLSTCTRTTLKNNRASPYPM 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,174
Number of Sequences: 336
Number of extensions: 4120
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)