Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_D04
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49...    30   3.0  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   3.9  
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254     29   5.2  
06_02_0194 + 12885340-12885708,12886098-12886367,12886476-128865...    29   6.9  
06_01_1042 + 8187536-8187616,8187713-8188315                           28   9.1  

>12_01_0059 +
           494876-494924,496060-496211,496344-496531,496971-497027,
           497123-497282,497389-497457,497712-497837,497972-498091
          Length = 306

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 140 SSQRWRNPTGL*RYQAFPPGKLPRALSXFRPCRLPD 247
           SS+ + +P G+  +  FP   LP A S ++P  LP+
Sbjct: 22  SSRNYVSPQGILEFYNFPIPSLPSASSNYQPSSLPE 57


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 146 QRWRN--PTGL*RYQAFPPGKLPRALSXFRPC--RLPDTCPPFSLREAWRFLIAHAVGIS 313
           Q+WR+  PTG   + +FP G LP A    +P   R P T P F  R A      + + + 
Sbjct: 27  QQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPAT-PLFPSRVAEGLFGLNGIEVG 85

Query: 314 VRCRSFAP 337
           +   +F P
Sbjct: 86  IEGDNFTP 93


>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
          Length = 425

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 565 QQSADTKYCSSSVAVVRPPLQELCSTAYIPRSA 467
           Q S   K   SSVA   PP + L ST  +PR++
Sbjct: 176 QNSIAAKLACSSVAAASPPPRNLVSTTPVPRNS 208



 Score = 28.7 bits (61), Expect = 6.9
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = -2

Query: 664 RNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVVRPPLQELCSTA 485
           RN + AN    A+S    A     N  S       S      SSSVA   PP + L ST 
Sbjct: 206 RNSITAN---LASSSVAAASPPPRNLVSTTPVPHNSIAANLASSSVAAASPPPRNLVSTT 262

Query: 484 YIPRSANPVTS 452
            +PR  NP+ +
Sbjct: 263 PVPR--NPIAA 271


>06_02_0194 +
           12885340-12885708,12886098-12886367,12886476-12886592,
           12888044-12888094,12889599-12889719,12890146-12890311,
           12890598-12890691
          Length = 395

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -3

Query: 654 CLQTKKPPLPAVVC-----LPDQELPTLFPKVTGFSRAQIPNTVLL 532
           CL  ++PP PA +C     LPD +  T+   +  F R      VLL
Sbjct: 46  CLALRRPPPPAELCVLLNDLPDNDFATVVKSLVEFRRNNGDEPVLL 91


>06_01_1042 + 8187536-8187616,8187713-8188315
          Length = 227

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 318 RTEIPTA*AMRKRHASRREKGGQVSGKRQGRXQESARGSXPGGNAWY 178
           RTE   A  +  R A   E+G +  G R+ R +   RGS   G +W+
Sbjct: 63  RTERERA-PLAARPAGEEEEGRRAGGWRRRRRRRQRRGSRSLGGSWW 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,069,137
Number of Sequences: 37544
Number of extensions: 540098
Number of successful extensions: 1483
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)