Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_D04
         (920 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown prot...    29   9.0  
AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA...    29   9.0  

>AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown protein.
          Length = 1231

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -2

Query: 733  RSTERQTP*RKDQ-RIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQS 557
            RS +R  P  K Q R + RS      L   NK+ + +  G    + + +S        +S
Sbjct: 1069 RSRDRAAPSEKRQERSYKRSSPEDDKLRRQNKEQSESKHGKHDQNNSDDSDRRAAKNTKS 1128

Query: 556  ADTKYCSSSVAVVRPP 509
            +D++  SS  AVV PP
Sbjct: 1129 SDSRVVSSVTAVVAPP 1144


>AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA
            protein.
          Length = 1231

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -2

Query: 733  RSTERQTP*RKDQ-RIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQS 557
            RS +R  P  K Q R + RS      L   NK+ + +  G    + + +S        +S
Sbjct: 1069 RSRDRAAPSEKRQERSYKRSSPEDDKLRRQNKEQSESKHGKHDQNNSDDSDRRAAKNTKS 1128

Query: 556  ADTKYCSSSVAVVRPP 509
            +D++  SS  AVV PP
Sbjct: 1129 SDSRVVSSVTAVVAPP 1144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,569,850
Number of Sequences: 53049
Number of extensions: 833349
Number of successful extensions: 2371
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2371
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)