Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C24
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2... 81 4e-15
AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2... 81 4e-15
AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa su... 81 4e-15
AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein. 81 4e-15
AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein. 77 7e-14
BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein. 73 1e-12
BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2... 73 1e-12
BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2... 73 1e-12
BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2... 73 1e-12
AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2... 73 1e-12
AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2... 73 1e-12
BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for MG... 43 0.001
>AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 151
Score = 81.4 bits (192), Expect = 4e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVK 369
K+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L N P+ + +Q VK
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVK 72
Query: 370 ENALTLTLKVLLAIKSAQIEEAVGSL 447
+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 DRAGSIVLKVLISFKANDIEKAVQSL 98
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 103 VDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 135
Score = 81.4 bits (192), Expect = 4e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVK 369
K+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L N P+ + +Q VK
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVK 72
Query: 370 ENALTLTLKVLLAIKSAQIEEAVGSL 447
+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 DRAGSIVLKVLISFKANDIEKAVQSL 98
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDK 547
+D LMKYIYKGFE PS+ SS LL WH+K
Sbjct: 103 VDLLMKYIYKGFESPSDNSSAMLLQWHEK 131
>AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa
subunit protein.
Length = 151
Score = 81.4 bits (192), Expect = 4e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVK 369
K+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L N P+ + +Q VK
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVK 72
Query: 370 ENALTLTLKVLLAIKSAQIEEAVGSL 447
+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 DRAGSIVLKVLISFKANDIEKAVQSL 98
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 103 VDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein.
Length = 151
Score = 81.4 bits (192), Expect = 4e-15
Identities = 39/86 (45%), Positives = 57/86 (66%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVK 369
K+D+D+Y+E+ F ++E G GPDEGEV S L QG AL+ L N P+ + +Q VK
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQAALKNPPINTKSQAVK 72
Query: 370 ENALTLTLKVLLAIKSAQIEEAVGSL 447
+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 DRAGSIVLKVLISFKANDIEKAVQSL 98
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 103 VDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 151
>AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein.
Length = 152
Score = 77.4 bits (182), Expect = 7e-14
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +1
Query: 190 KIDIDQYNEDNF--KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQ 363
++DID+++E+ F +++EA A TGPD EV LL QG + A L N+P+ + NQ
Sbjct: 12 RVDIDEFDENKFVDEQEEAAAAARTGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQA 71
Query: 364 VKENALTLTLKVLLAIKSAQIEEAVGSL 447
VKE A + LKVL KS++IE+AV SL
Sbjct: 72 VKERAQGVVLKVLTNFKSSEIEQAVQSL 99
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 104 VDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 152
>BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein.
Length = 154
Score = 73.3 bits (172), Expect = 1e-12
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ---GRHIDALKLVLNNAPLGSSNQ 360
K+D+D+Y+E+ F ++E G GPDEGEV S L G AL+ L N P+ + +Q
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRHSITGNMTAALQAALKNPPINTKSQ 72
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VK+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 AVKDRAGSIVLKVLISFKANDIEKAVQSL 101
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 106 VDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 154
>BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 73.3 bits (172), Expect = 1e-12
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQ 360
++DID+++E+ F +E+ A A GPD EV LL QG + A L N+P+ + NQ
Sbjct: 12 RVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQ 71
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VKE A + LKVL KS++IE+AV SL
Sbjct: 72 AVKERAQGVVLKVLTNFKSSEIEQAVQSL 100
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 105 VDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 73.3 bits (172), Expect = 1e-12
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQ 360
++DID+++E+ F +E+ A A GPD EV LL QG + A L N+P+ + NQ
Sbjct: 12 RVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQ 71
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VKE A + LKVL KS++IE+AV SL
Sbjct: 72 AVKERAQGVVLKVLTNFKSSEIEQAVQSL 100
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 105 VDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 73.3 bits (172), Expect = 1e-12
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQ 360
++DID+++E+ F +E+ A A GPD EV LL QG + A L N+P+ + NQ
Sbjct: 12 RVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQ 71
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VKE A + LKVL KS++IE+AV SL
Sbjct: 72 AVKERAQGVVLKVLTNFKSSEIEQAVQSL 100
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 105 VDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 73.3 bits (172), Expect = 1e-12
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQ 360
++DID+++E+ F +E+ A A GPD EV LL QG + A L N+P+ + NQ
Sbjct: 12 RVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRAFHAALRNSPVNTKNQ 71
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VKE A + LKVL KS++IE+AV SL
Sbjct: 72 AVKERAQGVVLKVLTNFKSSEIEQAVQSL 100
Score = 67.7 bits (158), Expect = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE P+E SS LL WH+KA +VGGLG I RVL+ R V
Sbjct: 105 VDLLMKYIYKGFEKPTENSSAVLLQWHEKALAVGGLGSIIRVLTARKTV 153
>AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 154
Score = 73.3 bits (172), Expect = 1e-12
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ---GRHIDALKLVLNNAPLGSSNQ 360
K+D+D+Y+E+ F ++E G GPDEGEV S L G AL+ L N P+ + +Q
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRHSITGNMTAALQAALKNPPINTKSQ 72
Query: 361 QVKENALTLTLKVLLAIKSAQIEEAVGSL 447
VK+ A ++ LKVL++ K+ IE+AV SL
Sbjct: 73 AVKDRAGSIVLKVLISFKANDIEKAVQSL 101
Score = 66.1 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +2
Query: 461 IDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV 607
+D LMKYIYKGFE PS+ SS LL WH+KA + GG+G I RVL+ R V
Sbjct: 106 VDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVLTARKTV 154
>BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for
MGC:88523) protein.
Length = 88
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 190 KIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ 297
K+D+D+Y+E+ F ++E G GPDEGEV S L Q
Sbjct: 13 KVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQ 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,746,570
Number of Sequences: 237096
Number of extensions: 2073661
Number of successful extensions: 3325
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3322
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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