Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C21
(887 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 41 2e-04
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 40 5e-04
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 38 0.002
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 34 0.024
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 34 0.031
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 33 0.041
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.054
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 33 0.072
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 33 0.072
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 33 0.072
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 32 0.095
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 32 0.095
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 31 0.22
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 31 0.22
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 30 0.51
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 30 0.51
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 29 0.67
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 29 0.88
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 4.7
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 27 4.7
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 8.2
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 26 8.2
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 224 KNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGI 340
KN G +EA+ KF ++ +A E+L DP +R +YD + G+
Sbjct: 38 KNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAYGEEGL 76
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 130 DYYALLGCDENSTVEQITAEYKILALQHHP 219
DYYA+L +N+T +QI +Y LALQ+HP
Sbjct: 12 DYYAILKLQKNATFQQIRKQYLFLALQYHP 41
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 131 TTTPYWVVMKTQLWSK*LQNIR----YLPCNTTLXKNDGEKEAEMK-FQKLKEAKEILCD 295
T+ Y+ ++K Q + Q IR +L +N G++E +K FQ+L+ A E+L D
Sbjct: 9 TSVDYYAILKLQKNAT-FQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSD 67
Query: 296 PSKRALYDK 322
+KR +YD+
Sbjct: 68 ATKRLIYDQ 76
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 230 DGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGI 340
D + AE KFQ ++ A E+L DPSK+ +YD + G+
Sbjct: 43 DQKAAAEEKFQIIQHAYEVLSDPSKKEIYDNFGEQGL 79
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 34.3 bits (75), Expect = 0.024
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 230 DGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSG 337
+ + A KFQKL EA ++L DP R YDK + G
Sbjct: 43 ENPEAAREKFQKLAEAYQVLSDPKLREKYDKLGKVG 78
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 112 QRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPXQKR 231
QR D DYY +L ++ + I Y+ LA+ +HP + R
Sbjct: 3 QRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNR 42
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 33.9 bits (74), Expect = 0.031
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 230 DGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGIAMG 349
D A KF+++ A EIL D KRA YD++ G+ G
Sbjct: 36 DKNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGG 75
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 33.5 bits (73), Expect = 0.041
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 124 DDDYYALLGCDENSTVEQITAEYKILALQHHP 219
D D Y +L + +S +++I A Y+ LALQ+HP
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHP 38
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 33.1 bits (72), Expect = 0.054
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 224 KNDGEKEAEMKFQKLKEAKEILCDPSKRALYD 319
KN G EAE +F+++ EA IL DP R +D
Sbjct: 380 KNAGNLEAEARFKEVGEAYTILSDPESRRRFD 411
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 103 LNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHP 219
L +++ D+Y +LG + +T +I Y+ LAL +HP
Sbjct: 340 LELKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHP 378
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 32.7 bits (71), Expect = 0.072
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 124 DDDYYALLGCDENSTVEQITAEYKILALQHHP 219
D D Y++LG +++++ E I Y+ ALQHHP
Sbjct: 29 DIDPYSVLGVEKDASDELIRRAYRKKALQHHP 60
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 32.7 bits (71), Expect = 0.072
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 194 RYLPCNTTLXKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGIAMGFKQW--LG 367
RY+P + G E +K LC + + +KWR+ G +G +W G
Sbjct: 809 RYVPKDQLDSNFGGSLHFEYHHEKYWPQLVELCKSRRLGILEKWRKMGSKIGTSEWDLKG 868
Query: 368 MKDHVQQSMHWSKPNTKDR 424
+++V+ + +P+ +R
Sbjct: 869 GEEYVELMQQYVRPSLTNR 887
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 32.7 bits (71), Expect = 0.072
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 230 DGEKEAEMKFQKLKEAKEILCDPSKRALYDKW 325
D E KF+++ A E+L DP +R LYD++
Sbjct: 36 DKNPNGEKKFKEISLAYEVLSDPQRRKLYDQY 67
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 32.3 bits (70), Expect = 0.095
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 124 DDDYYALLGCDENSTVEQITAEYKILALQHHP 219
D +YY LLG ++T I Y+ LA+++HP
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHP 37
Score = 29.5 bits (63), Expect = 0.67
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 230 DGEKEAEMKFQKLKEAKEILCDPSKRALYDKW 325
D + A KFQK+ EA ++L D R+ YD++
Sbjct: 42 DDPQGASEKFQKISEAYQVLGDEKLRSQYDQF 73
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 32.3 bits (70), Expect = 0.095
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 130 DYYALLGCDENSTVEQITAEYKILALQHHP 219
DYY +LG + S+ +I +Y L L++HP
Sbjct: 12 DYYTILGAESTSSYVEIRQQYLKLVLRYHP 41
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +2
Query: 224 KNDGEKEAEM--KFQKLKEAKEILCDPSKRALYDKWR 328
+N G +EAE+ +FQ +++A E+L DP R L+D+ R
Sbjct: 43 RNPG-REAEVLPQFQLIQKAHEVLKDPKLRELFDQRR 78
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 236 EKEAEMKFQKLKEAKEILCDPSKRALYDKW 325
+K A+ KF ++K+A E+L DP K+ +D +
Sbjct: 120 DKAAQDKFVEIKQAYEVLQDPKKKKAFDTY 149
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 130 DYYALLGCDENSTVEQITAEYKILALQHHP 219
DYYA+L ++ E+I YK AL+ HP
Sbjct: 4 DYYAILNITPKASAEEIKYAYKKAALETHP 33
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 245 AEMKFQKLKEAKEILCDPSKRALYDKWRRSGIA 343
A +FQ + EA +L D S+RA YD+ S A
Sbjct: 44 ATEQFQLVNEAYYVLSDNSRRAQYDRESASSSA 76
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 29.9 bits (64), Expect = 0.51
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 236 EKEAEMKFQKLKEAKEILCDPSKRALYDKW 325
++EA +F+ ++EA +IL DP R +YD +
Sbjct: 43 KEEAAERFRGVQEAYDILKDPESREMYDMY 72
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 124 DDDYYALLGCDENSTVEQITAEYKILALQHHP 219
D Y +L ++ E+I YK LAL HHP
Sbjct: 4 DTKLYDILEVHFEASAEEIKKSYKRLALLHHP 35
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 91 VDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHP 219
V +I+ Y+ + YY +L + T +I YK LALQ HP
Sbjct: 103 VQKIIKYKNH---QYYEILDLKKTCTDTEIKKSYKKLALQLHP 142
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 130 DYYALLGCDENSTVEQITAEYKILALQHHP 219
DYY LLG +E++ ++I ++ +L++HP
Sbjct: 9 DYYELLGINEDAQDQEIHRAWRKTSLKYHP 38
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 29.1 bits (62), Expect = 0.88
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 130 DYYALLGCDENSTVEQITAEYKILALQHHPXQKR 231
D Y +LG + ++V+ + YK L+++ HP + R
Sbjct: 98 DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVR 131
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 767 LVHYLRE*NNYCDLEKVNYTIRSARERNVSRILLV 871
++H L + ++ C KVNY I +A R++ R + V
Sbjct: 1289 VIHVLNKVHDSCQAYKVNYEIYNALIRSIYRFINV 1323
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 412 IRLGPVHGLLHMIFHTQPLLEAHSYTTTTPL 320
I L P H L+++ + P L SYT T L
Sbjct: 427 ITLAPQHSFLNIVINLNPALALKSYTIITLL 457
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 384 SSPCTGPSLILRIACWKEMEASRQVHLALAPV 479
SS C+ L I+C + +E ++HL + PV
Sbjct: 379 SSTCSRNRLCYSISCPRRLEQQARLHLKVQPV 410
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +3
Query: 687 SKKYLRNLAVTSCHYNCQIXLWLFSC 764
S+ Y + HYNC I +W C
Sbjct: 294 SRFYRSPEVILGLHYNCGIDMWSLGC 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,358,571
Number of Sequences: 5004
Number of extensions: 62481
Number of successful extensions: 179
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -