Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C20
(1341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 42 7e-04
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 39 0.007
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.15
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.15
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.80
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.80
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.80
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.80
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.80
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.8
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 31 2.4
AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical ... 30 3.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 4.3
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 5.6
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 7.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 7.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 9.9
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 29 9.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 9.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 9.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 9.9
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 29 9.9
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 42.3 bits (95), Expect = 7e-04
Identities = 36/147 (24%), Positives = 44/147 (29%), Gaps = 1/147 (0%)
Frame = +2
Query: 872 TKKXPPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXX-GXPKTXPXXXPXXXXAKX 1048
+++ PPPP P P GN R G P P P +
Sbjct: 93 SRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEG 152
Query: 1049 NQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPD 1228
N PPP P P P+ LS PPP PPK P P
Sbjct: 153 NASRRPPPPPKGTGSPPPPPTGE----PQDLSTEGNASRRPPP-PPKGTGTPPPPPTGEP 207
Query: 1229 KXPLXRSXXXQXPRPXXXXAXAPTTPP 1309
+ + P P +PT PP
Sbjct: 208 QDLSAEGYASRRPPPPPKGTGSPTPPP 234
Score = 40.7 bits (91), Expect = 0.002
Identities = 35/147 (23%), Positives = 42/147 (28%), Gaps = 1/147 (0%)
Frame = +2
Query: 872 TKKXPPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXX-GXPKTXPXXXPXXXXAKX 1048
+++ PPPP P P GN R G P P P +
Sbjct: 124 SRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEG 183
Query: 1049 NQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPD 1228
N PPP P P P+ LS PPP P TP P P
Sbjct: 184 NASRRPPPPPKGTGTPPPPPTGE----PQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQ 239
Query: 1229 KXPLXRSXXXQXPRPXXXXAXAPTTPP 1309
+ P P +P PP
Sbjct: 240 DLS-GEGNASRRPPPPPKGTGSPPPPP 265
Score = 37.5 bits (83), Expect = 0.021
Identities = 31/121 (25%), Positives = 37/121 (30%), Gaps = 1/121 (0%)
Frame = +2
Query: 872 TKKXPPPPXXXX-PXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKX 1048
+++ PPPP P P G R G P P P +
Sbjct: 186 SRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEG 245
Query: 1049 NQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPD 1228
N PPP P P P+ LS PPP PPK P P P+
Sbjct: 246 NASRRPPPPPKGTGSPPPPPTGE----PQDLSGEGNASRRPPP-PPKGTGTPPPPTGEPE 300
Query: 1229 K 1231
K
Sbjct: 301 K 301
Score = 35.9 bits (79), Expect = 0.065
Identities = 25/105 (23%), Positives = 31/105 (29%)
Frame = +2
Query: 995 GXPKTXPXXXPXXXXAKXNQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPP 1174
G P P P + N PPP P P P+ LS + P
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGE----PQDLSAEEGNASRRP 96
Query: 1175 PXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPP 1309
P PPK P P + + P P +P PP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 35.5 bits (78), Expect = 0.086
Identities = 34/146 (23%), Positives = 41/146 (28%), Gaps = 1/146 (0%)
Frame = +2
Query: 872 TKKXPPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXX-GXPKTXPXXXPXXXXAKX 1048
+++ PPPP P P GN R G P P P A+
Sbjct: 155 SRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEG 214
Query: 1049 NQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPD 1228
PPP P P P+ LS PPP PPK P P
Sbjct: 215 YASRRPPPPPKGTGSPTPPPTGE----PQDLSGEGNASRRPPP-PPKGTGSPPPPPTGEP 269
Query: 1229 KXPLXRSXXXQXPRPXXXXAXAPTTP 1306
+ + P P P P
Sbjct: 270 QDLSGEGNASRRPPPPPKGTGTPPPP 295
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/80 (25%), Positives = 22/80 (27%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PPP P P P+ LS PPP P P P P
Sbjct: 35 PPPKGTGTPPPPPTGE----PQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEG 90
Query: 1250 XXXQXPRPXXXXAXAPTTPP 1309
+ P P P PP
Sbjct: 91 NASRRPPPPPKGTGTPPPPP 110
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PPP PP P TP P P + P Q P + P PP + P+PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPS-PIPP 193
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.15
Identities = 33/132 (25%), Positives = 36/132 (27%), Gaps = 2/132 (1%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPPP P P P PP G R P P P
Sbjct: 264 PPPPPSVTPMP------PPMPPTPGMTPRPPPPPSSGMWP-PPPPPPPGRTPGPPGMPGM 316
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTP--XPXXSPDKXP 1237
PPP F P G P + PPP PP+ P P P + P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Query: 1238 LXRSXXXQXPRP 1273
S P P
Sbjct: 373 APPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 34.7 bits (76), Expect = 0.15
Identities = 33/132 (25%), Positives = 36/132 (27%), Gaps = 2/132 (1%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPPP P P P PP G R P P P
Sbjct: 274 PPPPPSVTPMP------PPMPPTPGMTPRPPPPPSSGMWP-PPPPPPPGRTPGPPGMPGM 326
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTP--XPXXSPDKXP 1237
PPP F P G P + PPP PP+ P P P + P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMR----YPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Query: 1238 LXRSXXXQXPRP 1273
S P P
Sbjct: 383 APPSGHGMIPPP 394
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.80
Identities = 24/73 (32%), Positives = 25/73 (34%)
Frame = +3
Query: 456 GWGKNXGVGFPPKNFLGERGKGPNTKNXPGAXIXFPXXXGGFXGXKXRGGXKXKXFFWGX 635
GWG GF P F G R G G + GG RGG G
Sbjct: 21 GWGPPSPWGFRPSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGG--------GW 72
Query: 636 GNXXGGGXXFGXG 674
GN GGG G G
Sbjct: 73 GNNGGGGNWGGNG 85
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +2
Query: 1172 PPXPPKXNPXTPX--PXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PP PK P P P SP P S P P A + PP P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.80
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Frame = +2
Query: 1169 PPPXPPKXNP-----XTPXPXXSPDKXPLXRSXXXQXP---RPXXXXAXAPTTPPXAXSA 1324
PPP PPK +P +P P + P R+ P P A PP A S
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 1325 XPLPP 1339
P PP
Sbjct: 298 PPPPP 302
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/90 (26%), Positives = 27/90 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PP P P PR S PPP P +P P SP P R
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRG 305
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
P +P PP + P PP
Sbjct: 306 SPPTGSLPPPQAGGSP--PPAGTGSPPPPP 333
Score = 29.9 bits (64), Expect = 4.3
Identities = 27/129 (20%), Positives = 33/129 (25%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPPP P P PP G+ R P T P + +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PPP P P P+ PP PP+ P P
Sbjct: 296 SPPPPP---PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 352
Query: 1244 RSXXXQXPR 1270
+ PR
Sbjct: 353 SPPTGRPPR 361
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/153 (21%), Positives = 40/153 (26%), Gaps = 1/153 (0%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPP P P P PPRG G P P + Q
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 341
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PP G P S + P P+ P P S ++
Sbjct: 342 RSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP-RGGPRKSSEESSES 400
Query: 1244 RSXXXQXPRPXXXXAXAPT-TPPXAXSAXPLPP 1339
R + PR PT +PP PP
Sbjct: 401 RE-EPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 432
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/89 (25%), Positives = 27/89 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PPP P S P S + PPP P +P P SP P R+
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSP---PPPRA 294
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLP 1336
P P + PP P P
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.80
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Frame = +2
Query: 1169 PPPXPPKXNP-----XTPXPXXSPDKXPLXRSXXXQXP---RPXXXXAXAPTTPPXAXSA 1324
PPP PPK +P +P P + P R+ P P A PP A S
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 1325 XPLPP 1339
P PP
Sbjct: 319 PPPPP 323
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/90 (26%), Positives = 27/90 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PP P P PR S PPP P +P P SP P R
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRG 326
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
P +P PP + P PP
Sbjct: 327 SPPTGSLPPPQAGGSP--PPAGTGSPPPPP 354
Score = 29.9 bits (64), Expect = 4.3
Identities = 27/129 (20%), Positives = 33/129 (25%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPPP P P PP G+ R P T P + +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PPP P P P+ PP PP+ P P
Sbjct: 317 SPPPPP---PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 373
Query: 1244 RSXXXQXPR 1270
+ PR
Sbjct: 374 SPPTGRPPR 382
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/153 (21%), Positives = 40/153 (26%), Gaps = 1/153 (0%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPP P P P PPRG G P P + Q
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 362
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PP G P S + P P+ P P S ++
Sbjct: 363 RSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP-RGGPRKSSEESSES 421
Query: 1244 RSXXXQXPRPXXXXAXAPT-TPPXAXSAXPLPP 1339
R + PR PT +PP PP
Sbjct: 422 RE-EPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 453
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/89 (25%), Positives = 27/89 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PPP P S P S + PPP P +P P SP P R+
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSP---PPPRA 315
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLP 1336
P P + PP P P
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.80
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Frame = +2
Query: 1169 PPPXPPKXNP-----XTPXPXXSPDKXPLXRSXXXQXP---RPXXXXAXAPTTPPXAXSA 1324
PPP PPK +P +P P + P R+ P P A PP A S
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 1325 XPLPP 1339
P PP
Sbjct: 304 PPPPP 308
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/90 (26%), Positives = 27/90 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PP P P PR S PPP P +P P SP P R
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR-AGSPPPPPPPRG 311
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
P +P PP + P PP
Sbjct: 312 SPPTGSLPPPQAGGSP--PPAGTGSPPPPP 339
Score = 29.9 bits (64), Expect = 4.3
Identities = 27/129 (20%), Positives = 33/129 (25%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPPP P P PP G+ R P T P + +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSP--PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PPP P P P+ PP PP+ P P
Sbjct: 302 SPPPPP---PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG 358
Query: 1244 RSXXXQXPR 1270
+ PR
Sbjct: 359 SPPTGRPPR 367
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/153 (21%), Positives = 40/153 (26%), Gaps = 1/153 (0%)
Frame = +2
Query: 884 PPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXAKXNQKXT 1063
PPP P P P PPRG G P P + Q
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPE 347
Query: 1064 XXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLX 1243
PP G P S + P P+ P P S ++
Sbjct: 348 RSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP-RGGPRKSSEESSES 406
Query: 1244 RSXXXQXPRPXXXXAXAPT-TPPXAXSAXPLPP 1339
R + PR PT +PP PP
Sbjct: 407 RE-EPRGPRRSPPTGSPPTGSPPTGRPPRGSPP 438
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/89 (25%), Positives = 27/89 (30%)
Frame = +2
Query: 1070 PPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRS 1249
PPP P S P S + PPP P +P P SP P R+
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSP---PPPRA 300
Query: 1250 XXXQXPRPXXXXAXAPTTPPXAXSAXPLP 1336
P P + PP P P
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 1157 QXNXPPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXP 1330
Q PPP PP P P P P PRP AP P P
Sbjct: 129 QQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQQQP 186
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical protein
ZK849.4 protein.
Length = 602
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPR-PXXXXAXAPTTPPXAXSAXPLPP 1339
PPP PP P P P P P + PR A P A A L P
Sbjct: 483 PPPSPPALPPALPNPNEPPPPPPPAEALRADQPRHSLIHEVGAQADPAEANGAQALSP 540
>AF098999-4|AAC68729.1| 659|Caenorhabditis elegans Hypothetical
protein W04C9.6 protein.
Length = 659
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PPP PP +P P SP P S P+ A TP A P+PP
Sbjct: 499 PPPMPPMVFQMSPSPQMSPQMSP-QMSQQRNYPQ---LQMMASQTPSMAPLPPPMPP 551
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 4.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = -3
Query: 766 PXXFFVGXVXXKFFFXPPXXHRERDFFXFFXPXPKXXPPPXXFPXPQKNXXXLXPPRXLX 587
P FF G + + PP HR R F P P PPP P PP L
Sbjct: 27 PDWFFPGPLRP--WGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHR----RPPWGLP 80
Query: 586 PXKPP 572
P PP
Sbjct: 81 PPPPP 85
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/113 (23%), Positives = 30/113 (26%)
Frame = +2
Query: 1001 PKTXPXXXPXXXXAKXNQKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPX 1180
PK P P K N K P P P P P+ N P
Sbjct: 183 PKPKPKPKPKPKP-KPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEP 241
Query: 1181 PPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PK P P P+ P + P+P P P L P
Sbjct: 242 KPK-----PKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKP 289
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/157 (21%), Positives = 37/157 (23%), Gaps = 2/157 (1%)
Frame = +2
Query: 875 KKXPPPPXXXXPXPXXFFXXPXXPPRGGNXLRXXXRXXXXGXPKTXPXXXPXXXXA-KXN 1051
K P P P P P P+ + PK P P K
Sbjct: 172 KPEPKPKPKPDPKPKPK-PKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK 230
Query: 1052 QKXTXXPPPXXXFXPXXXPGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPX-TPXPXXSPD 1228
K P P P P +L S + P P P P P P
Sbjct: 231 PKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPK 290
Query: 1229 KXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
S PRP P P L P
Sbjct: 291 PKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKPELKP 327
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical protein
T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 1169 PPPXPPKXNPXT-PXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXP 1330
PPP P+ P P P P P P P A P P A P
Sbjct: 101 PPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKPYNSYAQP 155
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +2
Query: 1157 QXNXPPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPP 1309
Q PPP PP P P P P+ P + P+P P P
Sbjct: 93 QGYVPPPPPPPTQPE-PEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAP 142
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.1 bits (62), Expect = 7.5
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRP 1273
PPP P + P P P P + P PRP
Sbjct: 548 PPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/78 (25%), Positives = 23/78 (29%)
Frame = +2
Query: 1106 PGXSXXXXPRLLSXXIXQXNXPPPXPPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXX 1285
PG S + + PPP P P P P + P P P
Sbjct: 54 PGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPP-PMFAGGIPPPPPMMGGIPPPPPMFG 112
Query: 1286 AXAPTTPPXAXSAXPLPP 1339
A P PP P PP
Sbjct: 113 APPPPPPPSGLGVAPQPP 130
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical protein
ZK354.8 protein.
Length = 483
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 1181 PPKXNPXTPXPXXSPDKXPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PP +P P P +P + P + Q P+P + P P A +PP
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQPPQPPVINSQLPRMSP----APAIPP 140
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDK---XPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PPP P P T P P P+ P P P PP P PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDK---XPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PPP P P T P P P+ P P P PP P PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/60 (28%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDK---XPLXRSXXXQXPRPXXXXAXAPTTPPXAXSAXPLPP 1339
PPP P P T P P P+ P P P PP P PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 1169 PPPXPPKXNPXTPXPXXSPDK 1231
PP P NP TP P SPD+
Sbjct: 21 PPGIQPHRNPFTPPPLPSPDE 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,910,486
Number of Sequences: 27780
Number of extensions: 281631
Number of successful extensions: 1195
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3767217436
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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