Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C19
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    30   2.4  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a...    28   7.4  
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m...    28   9.8  
AF039047-14|AAM15589.1|  978|Caenorhabditis elegans Human mlk (m...    28   9.8  

>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 179 VHQFIVRIYVLVFYFLSALPRFINCKTGFL-HSCTYINVFKL 301
           V  F+V   VL FY   A+  F  C++GF+   C  I +FKL
Sbjct: 137 VFSFLVVAGVLSFYLFLAMSCFGACRSGFIKFICLPITLFKL 178


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 179 VHQFIVRIYVLVFYFLSALPRFINCKTGFL-HSCTYINVFKL 301
           V  F+V   VL FY   A+  F  C++GF+   C  I +FKL
Sbjct: 137 VFSFLVVAGVLSFYLFLAMSCFGACRSGFIKFICLPITLFKL 178


>Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical
           protein F10A3.7 protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 715 SPISVSXFENNSLPIY*ISFKCLKLIFFSVVLFFLNGLXP 834
           SP  +  F N + PI+ +   C+  ++FS + +F+NG  P
Sbjct: 125 SPSGLLRFSNKTAPIWMLFIFCIAFLWFS-LCYFVNGPSP 163


>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 80 protein.
          Length = 4900

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 743  FSNXDTEIGDSKTCLCQNXIXSTLDPFHHHIEFP 642
            F   D+E  + K C  Q    S+L PFH ++  P
Sbjct: 3135 FGQEDSEHEELKHCSSQYSFDSSLPPFHRYVACP 3168


>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
           (mixed lineage kinase)homolog protein 1, isoform a
           protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 65  WWNHSDPWSLGYRIHGIQILQEPH*KKLPYTINF-ISNK 178
           W   SD WS G  +  +   +EP+   +P TI F I+NK
Sbjct: 373 WSEASDVWSYGVVLWELLTREEPYQGHIPATIAFQIANK 411


>AF039047-14|AAM15589.1|  978|Caenorhabditis elegans Human mlk
           (mixed lineage kinase)homolog protein 1, isoform b
           protein.
          Length = 978

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 65  WWNHSDPWSLGYRIHGIQILQEPH*KKLPYTINF-ISNK 178
           W   SD WS G  +  +   +EP+   +P TI F I+NK
Sbjct: 373 WSEASDVWSYGVVLWELLTREEPYQGHIPATIAFQIANK 411


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,978,119
Number of Sequences: 27780
Number of extensions: 328348
Number of successful extensions: 605
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)