Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C18
(932 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 146 4e-36
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 52 9e-08
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 34 0.025
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 33 0.058
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 33 0.076
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 32 0.10
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 28 1.6
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 28 1.6
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 28 1.6
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 27 5.0
SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr 1|||... 26 6.6
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 26 8.7
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 146 bits (354), Expect = 4e-36
Identities = 91/244 (37%), Positives = 129/244 (52%), Gaps = 17/244 (6%)
Frame = +3
Query: 177 VPPLGSQEVLVRMLAAPVNPADINTIQGKYPVK---VNLPC-------VPXXXXXXXXXX 326
VP +V VR LA+P+NP+DIN IQG YP K N C
Sbjct: 43 VPKCSKNQVNVRFLASPINPSDINQIQGVYPSKPPFTNDVCSSKPSAVAGNEGLVEVVDV 102
Query: 327 XXXXXSRICPGNKVIVTKPVQGTWR-DIAIFNKDVLRVVPDNLGTV-EAATLTVNPCTAY 500
PG I+ G+WR ++ I + ++ V ++ EAATL+VNPCTAY
Sbjct: 103 GDQFKGTFSPGQWAILGSVNLGSWRTEMNIDGRSLVPVDKSAFPSIAEAATLSVNPCTAY 162
Query: 501 RMLSDFKPVKDGLVVIQNGANSACGQNVIQICKAWGIKNINIVRNRPEINELKKYLECLG 680
+L + G IQ+GANS G IQ+ K +G K+IN+VRNRP+I +LK+ L+ LG
Sbjct: 163 CLLQHVVQLNKGDWFIQDGANSMVGIATIQLAKHFGYKSINVVRNRPDIEKLKEQLKSLG 222
Query: 681 ATYVLTEEELRSTNIFKEKKID-----KPSLALNCVGGKKSLEMLRHLQHSGCMVTYGGM 845
AT V+T+EEL K+K + + L ++CV G+ + EM +++ M T+GGM
Sbjct: 223 ATIVITDEELMDRKTMKQKVPEWIQGGEVKLGIDCVSGRVAAEMAKYMSKGATMATFGGM 282
Query: 846 SRDP 857
SR P
Sbjct: 283 SRQP 286
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 52.4 bits (120), Expect = 9e-08
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Frame = +3
Query: 177 VPPLGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVPXXXXXXXXXXXXXXX-SRI- 350
+P + E+LV++ AA +NP+D+ G +P V V +R+
Sbjct: 30 IPQPKNGELLVKIEAAAINPSDLMNATGGFPYTVYPRIVGRDYAGTVISGASHLVGTRVF 89
Query: 351 -CPGNKVIVTKPVQGTWRDIAIFNKDVLRVVPDNLGTVEAATLTVNPCTAYRMLSDFKPV 527
G+++ TK GT + I + +P NL EAA++ V TAY LS +
Sbjct: 90 GTSGSELSFTK--DGTHAEYCIIPEKAAVRMPSNLSFTEAASVGVPFTTAYLALSRGE-T 146
Query: 528 KDGLVVIQNGANSACGQNVIQICKAWGIKNINIVRN 635
K +V+ GA A G V QI + WG K I + R+
Sbjct: 147 KGSDIVLVVGALGAVGSAVCQIAEDWGCKVITVSRS 182
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 34.3 bits (75), Expect = 0.025
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 174 QVPP-LGSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCVP 296
+VP L EVLV++ AA +N D+ +G YP+ + LP VP
Sbjct: 23 EVPQKLNPGEVLVKLKAASLNYRDLIITKGLYPLPLQLPVVP 64
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 33.1 bits (72), Expect = 0.058
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = +3
Query: 384 VQGTWRDIAIFNKDVLRVVPDNLGTVEAATLTVNPCTAYRMLSDFKPVKDGLVVIQNGAN 563
V GT++ I N ++P+++ AA + T YR L + K V G + GA
Sbjct: 124 VDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALKESK-VGPGEWICIPGAG 182
Query: 564 SACGQNVIQICKAWGIKNINI 626
G +Q KA ++ + I
Sbjct: 183 GGLGHLAVQYAKAMAMRVVAI 203
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 189 GSQEVLVRMLAAPVNPADINTIQGKYPVKVNLPCV 293
G EVLV + V D++ +QG +P+ +P +
Sbjct: 32 GQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLI 66
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 32.7 bits (71), Expect = 0.076
Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Frame = +3
Query: 186 LGSQEVLVRMLAAPVNPAD---INTIQGKYPVKVNLPCVPXXXXXXXXXXXXXXXSRICP 356
LG +VLV ++A +NP D +NT Q LP +P
Sbjct: 41 LGPYDVLVEVVATSINPLDYKLMNTYQMIAKALFKLPNIPGYDFAGRVLAVGSEVKEFSA 100
Query: 357 GNKVIVTKPVQGTWRD-------IAIFNKDVLRVVPDNLGTVEAATLTVNPCTAYRMLSD 515
+V + R I +KDV +PD + E A + TA+ +L
Sbjct: 101 TQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWH-LPDGVSFNEGAGFGIAGLTAWEVLVR 159
Query: 516 FKPVKDGLVVIQNGANSACGQNVIQICKA 602
VK G ++ GA+ G + + KA
Sbjct: 160 QMKVKPGTKLVIEGASGGVGTFAVALAKA 188
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 32.3 bits (70), Expect = 0.10
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Frame = +3
Query: 357 GNKVIVTKPVQGTWRDIAIFNKDVLRVVPDNLGTVEAATLTVNPCTAYRMLSDFKPVKDG 536
G++V+ P G + ++ V + + A+ + TAY ++ + PVK G
Sbjct: 83 GDRVVYLTPF-GAYAQYTNVPTTLVSKVSEKIPLKIASAALLQGLTAYTLIEEAYPVKTG 141
Query: 537 LVVIQNGANSACGQNVIQICKAWGIKNINIVRNRPEINELKKYLECLGATYVLTEEELRS 716
V+ + A G + +C+ +N++++ + + ++ GA + E+L
Sbjct: 142 DTVVVHAAAGGVG---LLLCQMLRARNVHVIATASTAAKRRIAIK-NGAEIACSYEDL-- 195
Query: 717 TNIFKEKKIDK-PSLALNCVGGKKSLEMLRHLQHSGCMVTYGGMS 848
T + + K A + VG L L++ G MV++G S
Sbjct: 196 TKVVADYTNGKGVDAAYDSVGIDTLSSSLDALRNGGTMVSFGNAS 240
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 783 KSLEMLRHLQHSGCMVTYGGMSRDPGVNXXHXAFIFKKSFPFFGIL 920
+SLE++R + S + G+S P VN ++F F ++ I+
Sbjct: 1368 QSLEIIREVYSSLSTMIKEGLSSKPSVNETFSKYVFPVLFAYYDII 1413
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 383 WFSYYDFVPRTYSTDFFTYLFNNSNSFI 300
W+ Y +++P+T++T Y N N+F+
Sbjct: 98 WYGYIEYLPKTFNTPL--YFNENDNAFL 123
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 1.6
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Frame = +3
Query: 396 WRDIAIFNKDVLRVVPDNLGTVEAATLTVNPCTAYRMLSDF----KPVKDG--------L 539
WR+ + +++ VP N+ +AATL + TA + L+ + P DG
Sbjct: 96 WREYITLDVNLVYFVPKNITPSQAATLPLTFTTASQGLNQYLGLPLPPTDGSKNSAQQKW 155
Query: 540 VVIQNGANSACGQNVIQICKAWGIKNI 620
V++ +G++S GQ V+Q+ G K I
Sbjct: 156 VLVWSGSSSV-GQYVVQLAHHAGYKVI 181
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 642 EINELKKYLECLGATYVLTEEELRSTNIFKEKKIDKPSLALNCVGGKKS 788
++ E K+ LE A+Y E + ++ EKK SL N G +KS
Sbjct: 233 QLKEAKERLEAANASYQKLRREHKELALYHEKKTH--SLVCNLNGERKS 279
>SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 252
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 615 NINIVRNRPEINELKKYLECLGATYVL-TEEELRSTNIFKEKKIDKPSL 758
++ ++ N P + K YL C+G T L E ++ K K D P L
Sbjct: 129 HLGVLLNLPVVGVAKNYLHCVGLTESLDAHRETLKKHVLK-KTTDHPIL 176
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 553 TELIVRVDKMSFKYVKLGE*RILTLF 630
T+ R DK + KY +GE R+ T+F
Sbjct: 397 TDTFHRFDKFNLKYNPIGESRLRTIF 422
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,611,214
Number of Sequences: 5004
Number of extensions: 74970
Number of successful extensions: 212
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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