Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C11
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 123 2e-28
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 123 2e-28
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 62 7e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 55 8e-08
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 55 8e-08
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 54 1e-07
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 54 1e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 52 7e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 2e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 49 5e-06
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 49 5e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 49 5e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 48 7e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 47 2e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 47 2e-05
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 47 2e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 47 2e-05
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 47 2e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 47 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 47 2e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 47 2e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 47 2e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 47 2e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 46 4e-05
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 46 4e-05
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 46 4e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 4e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 45 8e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 45 8e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 45 8e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 1e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 43 3e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 42 4e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 42 4e-04
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 42 6e-04
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 42 6e-04
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 42 6e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 42 6e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 42 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 40 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 40 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.003
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 40 0.003
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 39 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.007
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.007
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.022
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 37 0.022
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 35 0.066
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 35 0.066
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.066
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 35 0.088
Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 32 0.47
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 32 0.62
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z68116-9|CAA92172.2| 101|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68116-4|CAA92171.2| 101|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68116-1|CAA92174.2| 101|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41555-7|AAY55846.1| 101|Caenorhabditis elegans Nematode specif... 31 1.1
U41555-6|AAY55845.1| 101|Caenorhabditis elegans Nematode specif... 31 1.1
U41555-5|AAY55844.1| 101|Caenorhabditis elegans Nematode specif... 31 1.1
U41555-3|AAY55847.1| 101|Caenorhabditis elegans Nematode specif... 31 1.1
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 1.4
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 1.4
U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specif... 29 4.4
U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specif... 29 4.4
U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specif... 29 4.4
Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83103-5|CAC42279.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z83103-4|CAB05471.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical ... 29 5.8
Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68116-6|CAD54145.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 123 bits (296), Expect = 2e-28
Identities = 51/75 (68%), Positives = 67/75 (89%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
LK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+ERRDAE ALD
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 398 DGRMLDGRELRVQMA 442
DG+++DGRELRV +A
Sbjct: 81 DGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 123 bits (296), Expect = 2e-28
Identities = 51/75 (68%), Positives = 67/75 (89%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
LK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+ERRDAE ALD
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 398 DGRMLDGRELRVQMA 442
DG+++DGRELRV +A
Sbjct: 81 DGKLVDGRELRVTLA 95
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N ++TT E+L F G++ ++ I DR T RGFAF+ F E A+ A++ M+G
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 404 RMLDGRELRVQMA 442
+GR LRV +A
Sbjct: 69 AEFNGRPLRVNLA 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N ++TT +DL F + G V ++ I DR T RGFAFV F E A+ A+D +G
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 404 RMLDGRELRVQMA 442
+GR LRV +A
Sbjct: 68 VDFNGRALRVNLA 80
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N+ Y+ T E++ F G V ++ I DR T RGFAFV F E A+ A++ ++G
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 404 RMLDGRELRVQMA 442
+GR LRV A
Sbjct: 70 VAFNGRNLRVNYA 82
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/88 (30%), Positives = 51/88 (57%)
Frame = +2
Query: 179 TEDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 358
++D H S ++ + L+++TT E+LR F R GEV + + RD T+ +RGF F+ F
Sbjct: 34 SDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
Query: 359 FERRDAEEALDTMDGRMLDGRELRVQMA 442
+ ++ L+ + LDG+++ ++A
Sbjct: 94 VDPSSVDKVLNNRE-HELDGKKIDPKVA 120
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F D++E D
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF----DSDEVAD 189
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/88 (30%), Positives = 51/88 (57%)
Frame = +2
Query: 179 TEDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 358
++D H S ++ + L+++TT E+LR F R GEV + + RD T+ +RGF F+ F
Sbjct: 34 SDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
Query: 359 FERRDAEEALDTMDGRMLDGRELRVQMA 442
+ ++ L+ + LDG+++ ++A
Sbjct: 94 VDPSSVDKVLNNRE-HELDGKKIDPKVA 120
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F D++E D
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF----DSDEVAD 189
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE A
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQE 211
Query: 395 MDGRMLDGRELRVQMA 442
+ G M++GR++ V A
Sbjct: 212 LHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE A
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQE 211
Query: 395 MDGRMLDGRELRVQMA 442
+ G M++GR++ V A
Sbjct: 212 LHGSMIEGRKIEVNCA 227
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 182 EDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 361
E +R + + RL + NL Y T +DL+ +F++ GEV ++ + D+ T +GFA V F
Sbjct: 269 ETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFV 328
Query: 362 ERRDAEEALDTMDGRMLDGRELRV 433
A A +DG + GR + +
Sbjct: 329 FPEAAVAAYSALDGYVFKGRMMHI 352
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES--RGFAFVRFFERRDAEEA 385
+RL V NL T + LR+ FE+ G++ D + +YT+E RGFAFV F + A A
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASL---KYTKEGKFRGFAFVGFLDEGSASNA 59
Query: 386 LDTMDGRMLDGRELRVQ 436
L + + ++L V+
Sbjct: 60 LAKSNQTFFNSKKLTVE 76
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVF-ERCGE-VGDIYIPRDRYTRE-----SRGFAFVRFFERR 370
S L V NL + TT L +F +R G+ V I + E S GF FV+F+
Sbjct: 641 STLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAF 700
Query: 371 DAEEALDTMDGRMLDGRELRVQMA 442
DA+ AL M G +LDG L ++++
Sbjct: 701 DAKTALKDMQGELLDGHSLELKIS 724
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIP-RDRYTRESRGFAFVRFFERRDAEEAL 388
++L V NL + + +++ +FE G V I IP + ++ RGF FV F +A A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAF 807
Query: 389 DTM-DGRMLDGRELRVQMA 442
D++ L GR L ++ A
Sbjct: 808 DSLVHSTHLYGRRLVLEWA 826
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL+Y T + + +F R G+V + + DR+ + GF FV ++ R DAE AL +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 398 DGRMLDGRELR 430
+D R +R
Sbjct: 99 SNTRMDDRVIR 109
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 26 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 85
Query: 404 RMLDGRELRVQMA 442
+ L R +R A
Sbjct: 86 QWLGRRTIRTNWA 98
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 36 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Query: 404 RMLDGRELRVQMA 442
+ L R +R A
Sbjct: 96 QWLGRRTIRTNWA 108
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 139 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Query: 404 RMLDGRELRVQMA 442
+ L R +R A
Sbjct: 199 QWLGRRTIRTNWA 211
Score = 35.9 bits (79), Expect = 0.038
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL T + + +F + G V + D + +AFV F + A +AL TM
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG---SNDPYAFVEFSDHGQASQALQTM 104
Query: 398 DGRMLDGRELRVQMA 442
+ R+L RE++V A
Sbjct: 105 NKRLLLDREMKVNWA 119
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE A++ M+G
Sbjct: 107 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 166
Query: 404 RMLDGRELRVQMA 442
+ L R +R A
Sbjct: 167 QWLGRRTIRTNWA 179
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N+ Y T E++ + F CG V + I DR++ +GFA+V F E+ + AL M
Sbjct: 82 VGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-AMTD 140
Query: 404 RMLDGRELRV 433
+L GR+++V
Sbjct: 141 SLLRGRQIKV 150
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/61 (40%), Positives = 34/61 (55%)
Frame = +2
Query: 260 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 439
LR F + GEV + I RD T + +G+ FV + R DAE A+D M+G L R +R
Sbjct: 148 LREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNW 207
Query: 440 A 442
A
Sbjct: 208 A 208
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +2
Query: 254 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 430
+++RR F+R G + ++ T + +G+AFV+F + A A+ M+ + G+ +R
Sbjct: 269 DEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVR 321
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.2 bits (117), Expect = 9e-07
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL+ TT +DLR VF GE+ + DR + SRGF F+ F DA A D +
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 398 DGRMLDGRELRVQMA 442
LDG ++RV +
Sbjct: 138 CNTDLDGHKIRVDFS 152
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 245 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 424
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 425 LRVQMA 442
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 245 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 424
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 425 LRVQMA 442
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 245 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 424
TT EDL +F R G++ + I RDR + +S +AF+ F + E+A MD ++D R
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 242
Query: 425 LRVQMA 442
+ V +
Sbjct: 243 IHVDFS 248
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 209 WSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 388
++++ V L Y T+ + L FE+ G++ + + DR T++SRG+ FV +R AE A
Sbjct: 34 FTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERAC 93
Query: 389 DTMDGRMLDGRELRVQMA 442
++DGR+ V +A
Sbjct: 94 KD-PNPIIDGRKANVNLA 110
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +2
Query: 194 HESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRD 373
++ AW + + L+Y + D+ VF + GEV +I + RD+ T +S+GFAF+ + ++R
Sbjct: 34 YKDSAW--IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
Query: 374 AEEALDTMDGRMLDGRELRV 433
A+D +G L R +RV
Sbjct: 92 TILAVDNFNGISLHKRMIRV 111
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V NL +L+ +F G++ + Y+ +GFAF+R R AE A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEA 169
Query: 395 MDGRMLDGRELRVQMA 442
+DGR++ GR++RV+ A
Sbjct: 170 IDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V NL +L+ +F G++ + Y+ +GFAF+R R AE A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEA 169
Query: 395 MDGRMLDGRELRVQMA 442
+DGR++ GR++RV+ A
Sbjct: 170 IDGRIIHGRQVRVRFA 185
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/86 (29%), Positives = 49/86 (56%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
++R ++ + V +L+ + E L+ F + GEV + + RD T++S+G+ FV F
Sbjct: 126 EMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPN 185
Query: 365 RRDAEEALDTMDGRMLDGRELRVQMA 442
+++AE A+ M+G+ + R +R A
Sbjct: 186 KQNAENAIAGMNGKWIGKRAVRTNWA 211
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N++ +TT DLR +F G++ ++ I + ++ +AFVR+ ++ A +A+ M+G
Sbjct: 241 VGNISQQTTDADLRDLFSTYGDIAEVRIFK------TQRYAFVRYEKKECATKAIMEMNG 294
Query: 404 RMLDGRELR 430
+ + G ++R
Sbjct: 295 KEMAGNQVR 303
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 48.4 bits (110), Expect = 7e-06
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
+ N+ + +T E++ F+ CG++ IP+D++T++ + FA++ F + E AL M+G
Sbjct: 59 IGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 117
Query: 404 RMLDGRELRV 433
+ R + V
Sbjct: 118 SLFRSRPIVV 127
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 272 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 433
F G V I + RD +R S G+A+V F + DAE ALDTM+ ++ GR +R+
Sbjct: 77 FSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRI 130
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/86 (20%), Positives = 43/86 (50%)
Frame = +2
Query: 182 EDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 361
++L + ++ + V N E L +F + GE+ + D + +GF FV F
Sbjct: 228 KELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFA 286
Query: 362 ERRDAEEALDTMDGRMLDGRELRVQM 439
++ A +A++ ++ +L+G + ++ +
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKLSV 312
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V N+ + LR F G + + D R S+GF FV F + +A A+ M
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVTDM 403
Query: 398 DGRMLDGRELRVQMA 442
+ +M+ + L V +A
Sbjct: 404 NSKMIGAKPLYVALA 418
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +2
Query: 272 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 433
F G V I + RD +R S G+A+V F + DAE ALDTM+ ++ GR +R+
Sbjct: 77 FSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRI 130
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/86 (20%), Positives = 43/86 (50%)
Frame = +2
Query: 182 EDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 361
++L + ++ + V N E L +F + GE+ + D + +GF FV F
Sbjct: 228 KELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFA 286
Query: 362 ERRDAEEALDTMDGRMLDGRELRVQM 439
++ A +A++ ++ +L+G + ++ +
Sbjct: 287 DQDAAGQAVEKLNDSILEGTDCKLSV 312
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V N+ + LR F G + + D R S+GF FV F + +A A+ M
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVTDM 403
Query: 398 DGRMLDGRELRVQMA 442
+ +M+ + L V +A
Sbjct: 404 NSKMIGAKPLYVALA 418
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 437 M 439
+
Sbjct: 574 L 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 437 M 439
+
Sbjct: 574 L 574
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE-SRGFAFVRFFERRDAEEALD 391
R+ + NL+ L +F G + ++ +P DR+ RG+ +V + DAE+++
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 392 TMDGRMLDGRELRVQM 439
MDG +DG + V+M
Sbjct: 194 HMDGGQIDGMAVHVEM 209
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 443 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 502
Query: 437 M 439
+
Sbjct: 503 L 503
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG-RMLDGRELRV 433
D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA EA + ++++G V
Sbjct: 70 DCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPV 129
Query: 434 QM 439
QM
Sbjct: 130 QM 131
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 437 M 439
+
Sbjct: 574 L 574
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 272 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 433
F G V I + RD TR S G+A+V F + DAE A+DTM+ L G+ +R+
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRI 105
Score = 35.1 bits (77), Expect = 0.066
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL + L++ FE G + + D R S+GF FV F + +A A+ M
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVTEM 377
Query: 398 DGRMLDGRELRV 433
+ +M+ + L V
Sbjct: 378 NSKMVCSKPLYV 389
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L + ++ + V N E L +VF + G + + +S+GF FV F
Sbjct: 204 ELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFAN 261
Query: 365 RRDAEEALDTMDGRMLDGRELRVQM 439
+AE A+ + ++G +L++ +
Sbjct: 262 PEEAETAVQALHDSTIEGTDLKLHV 286
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
+ N+ + +T E++ F+ CG + IP+D++T++ + FA++ F + E AL M+G
Sbjct: 65 IGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 123
Query: 404 RMLDGRELRV 433
+ R + V
Sbjct: 124 SLFRSRPIVV 133
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL-- 388
++ V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 389 --DTMDGRMLD 415
+DG+ +D
Sbjct: 84 RPHIIDGKTVD 94
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 272 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 433
F G V I + RD TR S G+A+V F + DAE A+DTM+ L G+ +R+
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRI 105
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL + L++ FE G + + D R S+GF FV F + +A A+ M
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVTEM 317
Query: 398 DGRMLDGRELRVQMA 442
+ +M+ + L V +A
Sbjct: 318 NSKMVCSKPLYVAIA 332
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/85 (21%), Positives = 39/85 (45%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L + ++ + V N E L ++F + G + + +S+GF FV F
Sbjct: 144 ELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFAN 201
Query: 365 RRDAEEALDTMDGRMLDGRELRVQM 439
+AE A+ + ++G +L++ +
Sbjct: 202 PEEAETAVQALHDSTIEGTDLKLHV 226
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 272 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 433
F G V I + RD TR S G+A+V F + DAE A+DTM+ L G+ +R+
Sbjct: 52 FSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRI 105
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL + L++ FE G + + D R S+GF FV F + +A A+ M
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVTEM 377
Query: 398 DGRMLDGRELRVQMA 442
+ +M+ + L V +A
Sbjct: 378 NSKMVCSKPLYVAIA 392
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/85 (21%), Positives = 39/85 (45%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L + ++ + V N E L ++F + G + + +S+GF FV F
Sbjct: 204 ELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFAN 261
Query: 365 RRDAEEALDTMDGRMLDGRELRVQM 439
+AE A+ + ++G +L++ +
Sbjct: 262 PEEAETAVQALHDSTIEGTDLKLHV 286
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N+ +++T ++ F CG+V + IP+D++T + FAFV F + + AL + G
Sbjct: 50 VGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VLSG 108
Query: 404 RMLDGRELRVQM 439
M R++ V +
Sbjct: 109 TMFRNRKIMVTL 120
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL-- 388
++ V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 389 --DTMDGRMLD 415
+DG+ +D
Sbjct: 84 RPHIIDGKTVD 94
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL-- 388
++ V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + A+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 389 --DTMDGRMLD 415
+DG+ +D
Sbjct: 84 RPHIIDGKTVD 94
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+ L ++ L T E++R +F GE+ + RD+ T +S G+ FV + DA A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 392 TMDGRMLDGRELRVQMA 442
+ +G L + ++V A
Sbjct: 102 SFNGLRLQNKTIKVSYA 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 194 HESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRD 373
++ + S L V + T +L +F G++ I D T S+G FVRF ++ +
Sbjct: 122 NDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDE 181
Query: 374 AEEALDTMDGRMLDG 418
A+ A+ T++G + G
Sbjct: 182 ADVAIKTLNGSIPSG 196
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAE 158
Query: 395 MDGRMLDGRELRVQMA 442
+G ++GR + V +A
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+++ V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
Query: 392 TMDGRMLDGRELRVQMA 442
+DG + G RV+++
Sbjct: 58 ALDGSRICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+++ V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
Query: 392 TMDGRMLDGRELRVQMA 442
+DG + G RV+++
Sbjct: 58 ALDGSRICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+++ V L T ++L +F+R G + +++ R GFAFV + + RDAE+A+
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
Query: 392 TMDGRMLDGRELRVQMA 442
+DG + G RV+++
Sbjct: 58 ALDGSRICGVRARVELS 74
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAE 158
Query: 395 MDGRMLDGRELRVQMA 442
+G ++GR + V +A
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = +2
Query: 221 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 400
+V NL ++LR +F + G V I+I RD+ T +GFAFV F R DA A+ ++
Sbjct: 179 RVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Query: 401 GRMLDGRELRVQ 436
+ L+V+
Sbjct: 239 DIRMYHMVLKVE 250
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
SR+ V ++++ + LRR F+ G + I + D T + FAFV + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 392 TMDGRMLDGRELRV 433
+M+G+ML GR L+V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 34.7 bits (76), Expect = 0.088
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +2
Query: 176 VTEDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 355
+ + ++ ++ + R+ V ++ + DL+ VFE GE+ + R R RGF ++
Sbjct: 195 IIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLE 254
Query: 356 FFERRDAEEALDTMDGRMLDGRELR 430
F EA+ M+ L G+ LR
Sbjct: 255 FNNLTSQSEAIAGMNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
SR+ V ++++ + LRR F+ G + I + D T + FAFV + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 392 TMDGRMLDGRELRV 433
+M+G+ML GR L+V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +2
Query: 176 VTEDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 355
+ + ++ ++ + R+ V ++ + DL+ VFE GE+ + R R RGF ++
Sbjct: 195 IIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLE 254
Query: 356 FFERRDAEEALDTMDGRMLDGRELRV 433
F EA+ M+ L G+ LRV
Sbjct: 255 FNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
SR+ V ++++ + LRR F+ G + I + D T + FAFV + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 392 TMDGRMLDGRELRV 433
+M+G+ML GR L+V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 36.3 bits (80), Expect = 0.029
Identities = 23/86 (26%), Positives = 42/86 (48%)
Frame = +2
Query: 176 VTEDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 355
+ + ++ ++ + R+ V ++ + DL+ VFE GE+ + R R RGF ++
Sbjct: 195 IIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLE 254
Query: 356 FFERRDAEEALDTMDGRMLDGRELRV 433
F EA+ M+ L G+ LRV
Sbjct: 255 FNNLTSQSEAIAGMNMFDLGGQYLRV 280
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES-RGFAFVRFFERRDAEEALD 391
RL + NL ++T EDL+ + G+ +I +P R ++ GF F++F E+ DAE+ +
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 392 TMDGRMLDGRELRVQMA 442
+ + GR + A
Sbjct: 156 FFNTNKVLGRSVAADWA 172
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 230 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM-DGR 406
NL+Y T E ++ + G++ I + + + S+G AFV F +A ++ + DG
Sbjct: 269 NLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDGV 328
Query: 407 MLDGRELRVQMA 442
++D R ++ +A
Sbjct: 329 IIDNRLVKANLA 340
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/75 (37%), Positives = 36/75 (48%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V T T + L F G+V I IP D + + RGF FV F DA A+D M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 398 DGRMLDGRELRVQMA 442
+ L G+ +RV A
Sbjct: 73 NESELFGKTIRVNFA 87
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+L + L++ TT E L F + G V D + RD T+ SRGF FV F AE A++
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+R+ + LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVH 54
Query: 392 TMDGRMLDGREL 427
++G+ L G +
Sbjct: 55 DLNGKELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+R+ + LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVH 54
Query: 392 TMDGRMLDGREL 427
++G+ L G +
Sbjct: 55 DLNGKELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+R+ + LT R + +D+ F G++ D+ + GF FV F ++RDAE+A+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVH 54
Query: 392 TMDGRMLDGREL 427
++G+ L G +
Sbjct: 55 DLNGKELGGERV 66
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +2
Query: 182 EDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 361
E+ R + L V + Y T+ LRR FE G++ + + D + RG+AF+ +
Sbjct: 94 ENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYS 152
Query: 362 ERRDAEEALDTMDGRMLDGRELRV 433
++ + A DG +DG+ L V
Sbjct: 153 DKAEMHTAYKKADGIKVDGKRLVV 176
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 269 VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLD-GRELRVQMA 442
+FE+ G++ D+ + D + SRG+AFV + + DA A T DG + G+ L+V ++
Sbjct: 219 LFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVS 277
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 275 ERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 442
E+ E+ Y DR ++ + +AF+ F ER D +A++ +G+ L+G + +A
Sbjct: 391 EKLNELFKEYASLDR-VKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
++ V NL +++ +F + G + + I R FAFV F + RDAE+A+
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRA 65
Query: 395 MDGRMLDGRELRVQ 436
DG DGR +RV+
Sbjct: 66 RDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
++ V NL +++ +F + G + + I R FAFV F + RDAE+A+
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRA 65
Query: 395 MDGRMLDGRELRVQ 436
DG DGR +RV+
Sbjct: 66 RDGYEFDGRRIRVE 79
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHD 54
Query: 395 MDGRMLDGRELR--VQMA 442
+DG+ ++G +R V+MA
Sbjct: 55 LDGKTMEGSSMRLVVEMA 72
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHD 54
Query: 395 MDGRMLDGRELR--VQMA 442
+DG+ ++G +R V+MA
Sbjct: 55 LDGKTMEGSSMRLVVEMA 72
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
RL + + Y D+ R + G++ +I + +Y GFAFV F + RDAE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHD 54
Query: 395 MDGRMLDGRELR--VQMA 442
+DG+ ++G +R V+MA
Sbjct: 55 LDGKTMEGSSMRLVVEMA 72
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 254 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 385
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A++A
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
++ V ++ EDL F + GEV + DR SRGFAFV F + AL
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 395 MDGRMLDGRELRVQMA 442
+ + + G+ + V+ A
Sbjct: 90 RE-QTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 254 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 385
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A++A
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
++ V ++ EDL F + GEV + DR SRGFAFV F + AL
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 395 MDGRMLDGRELRVQMA 442
+ + + G+ + V+ A
Sbjct: 90 RE-QTIKGKSVEVKPA 104
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V N+ T +D+ F G++ +I++ DR T +G+A V + +++A EA+D +
Sbjct: 59 VTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSND 118
Query: 404 RMLDGRELRV 433
L G+ ++V
Sbjct: 119 TDLLGQNVKV 128
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V L + + L + + G V + +P+DR T +GF FV F DA+ A+ ++
Sbjct: 17 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNM 76
Query: 404 RMLDGRELRVQMA 442
L G+ ++V A
Sbjct: 77 IKLYGKPIKVNKA 89
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 305 IPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 442
I RD + S+GFAF+ F ++ AL+ M+G+ L R + V A
Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V L + + L + + G V + +P+DR T +GF FV F DA+ A+ ++
Sbjct: 27 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNM 86
Query: 404 RMLDGRELRVQMA 442
L G+ ++V A
Sbjct: 87 IKLYGKPIKVNKA 99
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 305 IPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 442
I RD + S+GFAF+ F ++ AL+ M+G+ L R + V A
Sbjct: 142 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 187
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L E L + + T P DL F G V D+ I D T S+G +V F++
Sbjct: 16 ELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 75
Query: 365 RRDAEEALDTMDGRMLDGRELRVQ 436
L ++G+ L G L++Q
Sbjct: 76 EESVPLGL-ALNGQRLMGAPLQIQ 98
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V+NL + + +R +FE G + I + D RE+RGFA + F DA+++ + ++
Sbjct: 131 VENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNN 189
Query: 404 RMLDGRELRVQM 439
L GR +R+ +
Sbjct: 190 FELAGRCIRLSI 201
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L E L + + T P DL F G V D+ I D T S+G +V F++
Sbjct: 161 ELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 220
Query: 365 RRDAEEALDTMDGRMLDGRELRVQ 436
L ++G+ L G L++Q
Sbjct: 221 EESVPLGL-ALNGQRLMGAPLQIQ 243
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 403
V+NL + + +R +FE G + I + D RE+RGFA + F DA+++ + ++
Sbjct: 276 VENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADDAQKSCEQLNN 334
Query: 404 RMLDGRELRVQM 439
L GR +R+ +
Sbjct: 335 FELAGRCIRLSI 346
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 260 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----DTMDGRMLD 415
+R + + GE+ DI + RD T+ SRGF FV F + + + A+ +DG+ +D
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 56
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 260 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL----DTMDGRMLD 415
+R + + GE+ DI + RD T+ SRGF FV F + + + A+ +DG+ +D
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 56
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L + NL Y+ T E++ +F + G V I + T E+RG AFV + + DA+ A + +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGN---TAETRGTAFVVYEDIFDAKTACEHL 77
Query: 398 DGRMLDGRELRV 433
G + R L V
Sbjct: 78 SGYNVSNRYLVV 89
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
+L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R A T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 395 M-DGRMLDGRELRVQM 439
+ D + L G +Q+
Sbjct: 90 LHDQKTLPGMNRAMQV 105
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
+L ++F G + + DR T +S+ F FV + ++ A+ M+G + + L+VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 437 M 439
+
Sbjct: 504 L 504
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +2
Query: 197 ESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDA 376
+ M +L + L+ + + +++R +F GE+ ++ + R S+G AFV++ DA
Sbjct: 119 DKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHGLDA 177
Query: 377 EEALDTMDG 403
A+ + G
Sbjct: 178 HMAISALHG 186
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
+L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R A T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 395 M-DGRMLDGRELRVQM 439
+ D + L G +Q+
Sbjct: 90 LHDQKTLPGMNRAMQV 105
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
+L ++F G + + DR T +S+ F FV + ++ A+ M+G + + L+VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 437 M 439
+
Sbjct: 504 L 504
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +2
Query: 197 ESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDA 376
+ M +L + L+ + + +++R +F GE+ ++ + R S+G AFV++ DA
Sbjct: 119 DKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGA-DGASKGCAFVKYKHGLDA 177
Query: 377 EEALDTMDG 403
A+ + G
Sbjct: 178 HMAISALHG 186
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFE-RCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 400
V NL + T + L F + G V + I RD+ T + +GFAFV F + AL +M+
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-SME 308
Query: 401 GRMLDGRELRV 433
++ R+LR+
Sbjct: 309 TIKMEKRDLRI 319
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 218 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 397
L V NL + L++ FE G + + D R S+GF FV F + +A A+ M
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVTEM 314
Query: 398 DGRMLDGRELRVQMA 442
+ +M+ + L V +A
Sbjct: 315 NSKMVCSKPLYVAIA 329
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/85 (21%), Positives = 39/85 (45%)
Frame = +2
Query: 185 DLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 364
+L + ++ + V N E L ++F + G + + +S+GF FV F
Sbjct: 141 ELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFAN 198
Query: 365 RRDAEEALDTMDGRMLDGRELRVQM 439
+AE A+ + ++G +L++ +
Sbjct: 199 PEEAETAVQALHDSTIEGTDLKLHV 223
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 35.1 bits (77), Expect = 0.066
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
R+ + L R + D+ F G++ D+ + GF FV F ++RDA++A+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHD 54
Query: 395 MDGRMLDGREL 427
++G+ L G +
Sbjct: 55 LNGKELCGERV 65
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 269 VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 442
+FE+ G V D+ I + R S+GF FV DA+ A +G ++GR + V +A
Sbjct: 1 MFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +2
Query: 215 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 394
R+ +L + E L + F + + R+ T +S+G+ FV F + D A+
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 395 MDGRMLDGRELRVQ 436
MDG+ + R ++++
Sbjct: 264 MDGKYVGNRPIKLR 277
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 34.7 bits (76), Expect = 0.088
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
S++ V N+ ++ T ++L+ +F + G V + + + +G AFV F A++ +
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVA 741
Query: 392 TMDGRMLDGRELRVQMA 442
+ D ML REL V ++
Sbjct: 742 SGDKLMLRERELEVALS 758
>Z73427-7|CAA97799.1| 371|Caenorhabditis elegans Hypothetical
protein F58B3.7 protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 254 EDLRRVFERCGEVGDIYIPRDRYTRESRGF-AFVRFFERRDAEEALDTMDGRMLDGREL 427
++++ E+CG+V ++ + D E R FV F A +A M+GR GR +
Sbjct: 298 DEIKEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSV 356
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVG-DIYI--PRDRYTRES----RGFAFVRFFERRDAEE 382
V NL T E+ ++ +CG + DI P+ + RE +G + ++ E
Sbjct: 183 VSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVEL 242
Query: 383 ALDTMDGRMLDGRELRVQMA 442
A + +DG L+GRE++V+ A
Sbjct: 243 ACNILDGANLNGREVKVEEA 262
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 257 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 436
DL F G + + D+ T S+ F FV + + A A+ M+G + + L+VQ
Sbjct: 350 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 409
Query: 437 M 439
+
Sbjct: 410 L 410
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 224 VDNLTYRTTPEDLRRVFERCGEVG------DIYIPRDRYTRESRGFAFVRFFERRDAEEA 385
+ L Y + D+ + + C DI++ DR + +GFA+V F + A
Sbjct: 10 IGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTA 69
Query: 386 LDTMDGRMLDGRELRVQMA 442
+ ++G R L+V A
Sbjct: 70 ISGLNGADFGNRVLKVNRA 88
>Z68116-9|CAA92172.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.6 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-4|CAA92171.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.7 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-1|CAA92174.2| 101|Caenorhabditis elegans Hypothetical
protein F42F12.1 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-7|AAY55846.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 6 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-6|AAY55845.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 5 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-5|AAY55844.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 4 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-3|AAY55847.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 2 protein.
Length = 101
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + Q+ C N C ++CA+ YDG T
Sbjct: 40 SPWISFATQTNKTCYNLCVHNCAAVYDGSCTT 71
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+R+ V N+ + +DL +F G V + I + R S+GF FV E+A
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARA 108
Query: 392 TMDGRMLDGRELRVQMA 442
+ + GR + V+ A
Sbjct: 109 ALHESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +2
Query: 212 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 391
+R+ V N+ + +DL +F G V + I + R S+GF FV E+A
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARA 108
Query: 392 TMDGRMLDGRELRVQMA 442
+ + GR + V+ A
Sbjct: 109 ALHESHVQGRIIEVRRA 125
>U41555-8|AAL65774.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 7 protein.
Length = 101
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-4|AAY55843.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 3 protein.
Length = 101
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>U41555-2|AAU05596.1| 101|Caenorhabditis elegans Nematode specific
peptide family,group c protein 1 protein.
Length = 101
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLS-QSESDCANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHTNKTCYNLCVHNCAAVYDGSCTT 71
>Z83103-8|CAE17765.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.9 protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDG 513
SPW S + +++ C N C ++CA+ YDG
Sbjct: 41 SPWLSYATAKNKTCYNLCVHNCAAVYDG 68
>Z83103-7|CAE17764.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.8 protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDG 513
SPW S + +++ C N C ++CA+ YDG
Sbjct: 41 SPWLSYATAKNKTCYNLCVHNCAAVYDG 68
>Z83103-6|CAD44104.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.7 protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDG 513
SPW S + +++ C N C ++CA+ YDG
Sbjct: 41 SPWLSYATAKNKTCYNLCVHNCAAVYDG 68
>Z83103-5|CAC42279.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.6 protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDG 513
SPW S + +++ C N C ++CA+ YDG
Sbjct: 41 SPWLSYATAKNKTCYNLCVHNCAAVYDG 68
>Z83103-4|CAB05471.1| 103|Caenorhabditis elegans Hypothetical
protein D1025.4 protein.
Length = 103
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDG 513
SPW S + +++ C N C ++CA+ YDG
Sbjct: 41 SPWLSYATAKNKTCYNLCVHNCAAVYDG 68
>AC006696-7|AAF39988.1| 140|Caenorhabditis elegans Hypothetical
protein W08E12.3 protein.
Length = 140
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 551 NGCGYDCASNYDGGNETWTRACDRND--SCMAMRGDHIAPSEREVPCRPTFVRPS 393
N CG C N G T + + N+ SC G AP P +P F++PS
Sbjct: 48 NNCG--CNGNNCGPQVTVVQVPNNNNGCSCSPCNGPVCAPMCNSCPPQPIFIQPS 100
>AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.4 protein.
Length = 141
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 551 NGCGYDCASNYDGGNETWTRACDRND--SCMAMRGDHIAPSEREVPCRPTFVRPS 393
N CG C N G T + + N+ SC G AP P +P F++PS
Sbjct: 48 NNCG--CNGNNCGPQVTVVQVPNNNNGCSCSPCNGPICAPMCNSCPPQPIFIQPS 100
>AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.5 protein.
Length = 141
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -3
Query: 551 NGCGYDCASNYDGGNETWTRACDRND--SCMAMRGDHIAPSEREVPCRPTFVRPS 393
N CG C N G T + + N+ SC G AP P +P F++PS
Sbjct: 48 NNCG--CNGNNCGPQVTVVQVPNNNNGCSCSPCNGPICAPMCNSCPPQPIFIQPS 100
>Z68116-8|CAH60761.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.10 protein.
Length = 101
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHRNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-6|CAD54145.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.9 protein.
Length = 101
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHRNKTCYNLCVHNCAAVYDGSCTT 71
>Z68116-5|CAD54144.1| 101|Caenorhabditis elegans Hypothetical
protein F42F12.8 protein.
Length = 101
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 593 SPWNSLSQSESD-CANGCGYDCASNYDGGNET 501
SPW S + + C N C ++CA+ YDG T
Sbjct: 40 SPWISFATHRNKTCYNLCVHNCAAVYDGSCTT 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,469,652
Number of Sequences: 27780
Number of extensions: 316058
Number of successful extensions: 953
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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