Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C10
(887 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 76 2e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 7e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.56
U42614-1|AAC47143.1| 111|Anopheles gambiae soluble guanylate cy... 23 9.4
U42613-1|AAC47142.1| 111|Anopheles gambiae soluble guanylate cy... 23 9.4
U42612-1|AAC47141.1| 111|Anopheles gambiae soluble guanylate cy... 23 9.4
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 9.4
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 459 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 638
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 639 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 737
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 751 VDNEAIYDICRR 786
+DNEA+YDIC R
Sbjct: 98 IDNEALYDICFR 109
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 459 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 638
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 639 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 737
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 751 VDNEAIYDICRR 786
+DNEA+YDIC R
Sbjct: 98 IDNEALYDICFR 109
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 459 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 638
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 639 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 737
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 751 VDNEAIYDICRR 786
+DNEA+YDIC R
Sbjct: 98 IDNEALYDICFR 109
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 75.8 bits (178), Expect = 2e-15
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 459 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 638
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 639 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 737
+++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTD 93
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 751 VDNEAIYDICRR 786
+DNEA+YDIC R
Sbjct: 98 IDNEALYDICFR 109
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 7e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 141 MRECISVHVGQAGVQIGNACWE 206
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +1
Query: 196 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 375
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 376 XXAHTDSC 399
A T SC
Sbjct: 79 APARTASC 86
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.56
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 247 CPQTRPSGVETILSTLSSARPELAS 321
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.56
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 190 VMPAGSFTAWSTASSLMARCPQTRPSGV 273
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>U42614-1|AAC47143.1| 111|Anopheles gambiae soluble guanylate
cyclase protein.
Length = 111
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 69 LSGLPNECESNLK 31
+SGLP+ECE++ K
Sbjct: 23 VSGLPDECENHAK 35
>U42613-1|AAC47142.1| 111|Anopheles gambiae soluble guanylate
cyclase protein.
Length = 111
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 69 LSGLPNECESNLK 31
+SGLP+ECE++ K
Sbjct: 23 VSGLPDECENHAK 35
>U42612-1|AAC47141.1| 111|Anopheles gambiae soluble guanylate
cyclase protein.
Length = 111
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 69 LSGLPNECESNLK 31
+SGLP+ECE++ K
Sbjct: 23 VSGLPDECENHAK 35
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.4 bits (48), Expect = 9.4
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 69 LSGLPNECESNLK 31
+SGLP+ECE++ K
Sbjct: 561 VSGLPDECENHAK 573
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 935,438
Number of Sequences: 2352
Number of extensions: 20358
Number of successful extensions: 57
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -