Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C09
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 215 5e-57
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 140 2e-34
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 111 1e-25
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 107 3e-24
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 97 2e-21
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 94 2e-20
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 87 4e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 85 1e-17
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 84 2e-17
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 81 2e-16
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 80 5e-16
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 77 3e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 77 4e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 74 2e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 74 3e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 70 5e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 67 4e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 54 4e-08
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 29 0.89
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.6
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 2.7
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 27 3.6
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 26 6.3
SPAC1687.02 |||CAAX prenyl protease |Schizosaccharomyces pombe|c... 26 6.3
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 6.3
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 26 8.3
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 26 8.3
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 8.3
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 215 bits (526), Expect = 5e-57
Identities = 100/195 (51%), Positives = 143/195 (73%)
Frame = +3
Query: 204 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 383
+REYK+VV+G GGVGKSALT+Q +Q FV++YDPTIEDSYRK+ E+DG+ +L++LDTAG
Sbjct: 6 LREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAG 65
Query: 384 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 563
E+++AMR+ YM+ G+GF+LVY+IT++S+F+++ +QILRVKD P+VLV NK DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 564 EAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDEHKPXNGN 743
EAERVV + +G+ LA+ +C ++ETSAK +++V + FY LVR I + + K E K
Sbjct: 126 EAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYN--KSEEKGFQNK 183
Query: 744 VLFCKSAVRVSDASR 788
+ V S A R
Sbjct: 184 QAVQTAQVPASTAKR 198
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 140 bits (339), Expect = 2e-34
Identities = 69/168 (41%), Positives = 112/168 (66%)
Frame = +3
Query: 204 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 383
++ +I VLGS VGKS+LTVQ+V+ FVE Y PTIE+++ K ++ GQ+ EI+DTAG
Sbjct: 4 IKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAG 63
Query: 384 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 563
++++ + + G+VLVYSIT++S+F ++ +R++IL T VP+V+VGNK+DL
Sbjct: 64 QDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDL 123
Query: 564 EAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKS 707
+R V E+G+ LA + CA+ E SA+ +V F ++ +I K++
Sbjct: 124 HMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIEKQA 171
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 111 bits (267), Expect = 1e-25
Identities = 55/164 (33%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQ 392
K++++G GVGKS L ++F + F + TI ++ + +E+DG++ L+I DTAG E+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 393 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEAE 572
F + Y + G +L+Y +T + +F++++ + + + +V +L+GNK D E +
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKILIGNKCDCEDQ 129
Query: 573 RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKK 704
R V EQGQ LA F+E SAK ++V++ F+ L R+I K+
Sbjct: 130 RQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQ 173
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 107 bits (256), Expect = 3e-24
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Frame = +3
Query: 213 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 389
+K++++G GVGKS L ++F + E Y TI ++ + E++G+ L+I DTAG E
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 390 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 569
+F + Y + G ++VY +T Q +FN+++ ++I R V +LVGNK+D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDMVD 127
Query: 570 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKK 704
++VV + A N F+ETSAK +V F + RQI ++
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKER 172
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 97.5 bits (232), Expect = 2e-21
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 1/165 (0%)
Frame = +3
Query: 204 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTA 380
+R++K+V LG VGK++L +F+ F Y TI D K + ++ + L++ DTA
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 381 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 560
G E+F ++ Y+++ ++VY IT ++F + + E + R + DV +VLVGNKTD
Sbjct: 69 GQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGNKTD 127
Query: 561 LEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 695
L +R V +E+G+ A+ METSAKA +V +F + + +
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQML 172
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 94.3 bits (224), Expect = 2e-20
Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%)
Frame = +3
Query: 213 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 389
+K V++G GVGKS L ++F + F + TI + + + +D ++ +I DTAG E
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 390 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 569
++ A+ Y + G ++VY IT QS+F+++ ++ LR +++ ++LVGNKTDL
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKE-LREHADSNIVIMLVGNKTDLLH 129
Query: 570 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 695
R V E+ Q A N +F+ETSA +V + F ++ +I
Sbjct: 130 LRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 86.6 bits (205), Expect = 4e-18
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 3/180 (1%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDGQQCM-LEILDTAGTE 389
K+V+LG VGKS+L ++FV+ F + + TI ++ Q + +D + LEI DTAG E
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 390 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 569
++ ++ +Y +N ++VY IT ++ + +++ R + + + L GNK DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDLAQ 134
Query: 570 E-RVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDEHKPXNGNV 746
E R V K + A N F ETSAK +VN++F I KK P +D+ G V
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELF----TAIAKKLPLEDKLNQARGAV 190
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 85.0 bits (201), Expect = 1e-17
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 392
K+V+LG GVGK+ L QFV F +Y TI D K V VD + L++ DTAG E+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 393 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL--RVKDTTDVPMVLVGNKTDLE 566
F ++ + + V+VY++ +F+ +++ R++ L +D P ++VGN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 567 A-ERVVGKEQGQNL--ARH-FNCAFMETSAKAKIHVNDVFYDLVRQINKKSPKKDE 722
A +R V + + ++H N E SAK +V D+F + R + +D+
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDD 185
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 84.2 bits (199), Expect = 2e-17
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQ 392
K+++LG GVGK+++ Q+V F + Y TI D K+V VD + L++ DTAG E+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 393 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL---RVKDTTDVPMVLVGNKTDL 563
F ++ + + VLVY + +F L R++ L + P +L+GNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 564 EAE-RVVGKEQGQNLAR-HFNCAFMETSAKAKIHVNDVF 674
E + R+V K + + + ETSAK I+V + F
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 81.4 bits (192), Expect = 2e-16
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 395
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDY 67
Query: 396 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDLE-- 566
+R L + ++ +S+ A + +++Q+ ++L +++P++LVG K DL
Sbjct: 68 DRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHF--CSNLPILLVGCKVDLRND 125
Query: 567 ----------AERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLVR 689
+++ + E+GQ +A+ ++E SAK VN+VF R
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 79.8 bits (188), Expect = 5e-16
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEIL--DTAGTE 389
K+VV+G GG GK+ L + F G F E+Y PT+ ++Y + ++E+ DTAG E
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 390 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDL-QDLREQILRVKDTTDVPMVLVGNKTDLE 566
++ +R L N +L +SI ++ N++ + ++ T P+VLVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRT--PIVLVGLKADLR 133
Query: 567 AER------------VVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQINKKS 707
+R V +Q Q++A N ++E SAK VN+VF V KKS
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAVGLTIKKS 192
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 3e-15
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 395
KIV+LG G GK++L F +G F + Y+PTI ++Y + VDG L + DTAG E++
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 396 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRV-KDTTDVPMVLVGNKTDL--- 563
+R L + ++ +++ ++ + ++ + + + V + V +VLV K DL
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENV--ITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 564 -----EAERVVGKEQGQNLARHFNCA-FMETSAKAKIHVNDVFYDLVRQINKKSPK 713
+ +++ E+G A+ N ++E SAK VN+ F + R P+
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQPR 188
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 76.6 bits (180), Expect = 4e-15
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 14/189 (7%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 395
K+V++G G GK+ L + F +G F E Y PT+ ++Y VEVDG+ L + DTAG E +
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDY 67
Query: 396 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQD-LREQILRVKDTTDVPMVLVGNKTDLE-- 566
+R L + ++ +++ + + +++Q+ ++L + +P++LV K DL
Sbjct: 68 DRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHF--CSSLPILLVACKADLRND 125
Query: 567 ----------AERVVGKEQGQNLARHFNC-AFMETSAKAKIHVNDVFYDLVRQINKKSPK 713
+ V E+GQ +A+ ++E SAK V +VF R K
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLK--H 183
Query: 714 KDEHKPXNG 740
K + KP +G
Sbjct: 184 KPKVKPSSG 192
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 74.1 bits (174), Expect = 2e-14
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = +3
Query: 213 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDGQQCMLEILDTAGTE 389
+K+V++G GG GK+ + + G F +KY T+ + + + + + DTAG E
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 390 QFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEA 569
+ +RD Y GQ ++++ +T++ T+ ++ ++RV + ++P+VL GNK D++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE--NIPIVLCGNKVDVKE 127
Query: 570 ERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVFYDLVRQI 695
+V K + R N + + SAK+ + F L R++
Sbjct: 128 RKV--KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 73.7 bits (173), Expect = 3e-14
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDG-----QQCMLEILDTA 380
KIV+ G G GKS L +FV+ + ++ T+ + ++ G ++ L+I DTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 381 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD 560
G E+F ++ Y + G VLVY +T + +F +L I + +T + +VL G+K+D
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPST-ICVVLAGSKSD 129
Query: 561 LEAERVVGKEQGQNLA--RHFNCAFMETSAKAKIHVNDVFYDLVRQI 695
L+ +R V E+ +H + A ETS+ +V + F +V I
Sbjct: 130 LQNQRQVSTEEAAEFCSEKHISSAH-ETSSYTGSNVEECFLSVVSTI 175
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 69.7 bits (163), Expect = 5e-13
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 14/189 (7%)
Frame = +3
Query: 204 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAG 383
M K VV+G G VGK+ L + + F Y PT+ D+Y V + + L + DTAG
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 384 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDL 563
E + +R L F++ +S+T+ ++F ++++ + VP ++VG + DL
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDL 119
Query: 564 EAERVVGK------------EQGQNLARHFNCA-FMETSAKAKIHVNDVFYD-LVRQINK 701
+ V + EQG+ LAR ++E SA + + +VF + +V ++
Sbjct: 120 RDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDP 179
Query: 702 KSPKKDEHK 728
P K + K
Sbjct: 180 PVPHKKKSK 188
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 66.9 bits (156), Expect = 4e-12
Identities = 36/125 (28%), Positives = 65/125 (52%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQF 395
K+VV+G G GK++L F G F +Y PT+ ++Y VDG+ L + DTAG E++
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEY 69
Query: 396 TAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTDLEAER 575
+R + ++ ++I + + ++ + + +VP +LVG K DL ++
Sbjct: 70 ERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTL-CPNVPFILVGMKADLRSDP 128
Query: 576 VVGKE 590
V +E
Sbjct: 129 VAIEE 133
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 53.6 bits (123), Expect = 4e-08
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Frame = +3
Query: 216 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQQCMLEILDTAGTEQ 392
K+ ++G +GK++L V +VQG F E+ T+ ++ K + + + I D G +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 393 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTTDVPMVLVGNKTD---- 560
F M + + + ++ ++ +ST N +++ Q R + T VP +L+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVP-ILIGTKYDHFMT 129
Query: 561 --LEAERVVGKEQGQNLARHFNCAFMETSAKAKIHVNDVF 674
E + + K Q + A+ + + S I+V +F
Sbjct: 130 FPREDQEEITK-QARRYAKAMKASLVFCSTSHSINVQKIF 168
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 210 EYKIVVL-GSGGVGKSALTVQFVQGIFVEK 296
++KI+VL G GGVGKS + Q G+ +E+
Sbjct: 60 KHKILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 204 MREYKIVVLGSGGVGKSALTVQFVQ 278
M+E ++V+ G GVGKS+L +Q
Sbjct: 1 MKEVRVVICGDQGVGKSSLISALIQ 25
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 280 PCTNCTVRADFPTPPLPNTTILYSR 206
P TN T R +P P+PNT + Y+R
Sbjct: 315 PVTNET-RQSYPNLPIPNTPLYYTR 338
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 184 VTQYRE*CASTK*LC*AAEAWESPP*QCNLYKASLSRN-TTQPSKTATGNK 333
+ Y E + + +C +AW PP +L + + N T PS + G K
Sbjct: 210 LASYGEKASDVRYVCLFCKAWNGPPIDKSLPSSEMDSNLQTNPSSISKGKK 260
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 219 IVVLGSGGVGKSALTVQFVQGIFVEK 296
+V+ G GGVGKS++T Q + K
Sbjct: 9 LVLSGKGGVGKSSVTTQLALSLHDSK 34
>SPAC1687.02 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = -2
Query: 332 LFPVAVFDGWVVFLDKD-ALYKLHCQGGLSHASAA*HNYFVLAHYSLYCVTLNLFIEIKD 156
+F +++ W+V DK+ L+ +H + LS+A A ++ S + I +
Sbjct: 84 IFIGPLYEVWIV--DKEYRLFFIHLKDCLSNAIA--WRNIIIGPLSEELTFRCCIVPICE 139
Query: 155 QIGNKHINLVIIAKKTFNKSNRHDTVKRAMAQPN 54
G + ++ +A F ++ H T + +A PN
Sbjct: 140 AAGWSRLKIIFVAPLLFGMAHIHHTYEFLLAYPN 173
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 381 LRYPGSRAYIAVHQLPLVSCSCLRWLGRI 295
+ +P SR H LP++ CS L +G I
Sbjct: 65 MSHPSSRKDTMEHGLPIILCSTLMLVGNI 93
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 280 PCTNCTVRADFPTPPLPNTTILYSRIIPYI 191
P +CT++ + T +P T L++ I PY+
Sbjct: 569 PLGSCTMKLNAVTEMMPITNPLFANIHPYV 598
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 122 IAKKTFNKSNRHDTVKRAMAQPNN 51
IAKK K NR +T KRA NN
Sbjct: 37 IAKKEAQKKNRKETFKRAETFINN 60
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 653 FRFCRRLHESAVEVARQILS 594
F FC LHE VE A QIL+
Sbjct: 54 FGFCEFLHEQDVEYACQILN 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,635,339
Number of Sequences: 5004
Number of extensions: 77005
Number of successful extensions: 264
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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