Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C08
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 266 3e-72
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 156 3e-39
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 147 2e-36
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 143 3e-35
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 139 6e-34
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 135 7e-33
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 108 9e-25
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 104 2e-23
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 1e-07
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 28 1.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 4.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.7
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 6.2
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 6.2
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 8.2
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 266 bits (652), Expect = 3e-72
Identities = 135/216 (62%), Positives = 164/216 (75%)
Frame = +1
Query: 118 LREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKL 297
L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDGATIMKL
Sbjct: 13 LKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKL 72
Query: 298 LDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 477
LDIVHPAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A
Sbjct: 73 LDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKA 132
Query: 478 SRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 657
++LA+ KIKE A+ +D + RDLL KCASTAM+SKLI F+K+VVDAVL+LD
Sbjct: 133 AQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQ 192
Query: 658 PLLPLDMIGIKKVPGGALEGLFXWFPXVAFKKXFQF 765
L +MIGIKKVPGGA+E VAFKK F +
Sbjct: 193 EDLNENMIGIKKVPGGAMEDSLL-VKGVAFKKTFSY 227
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3
Query: 726 LVPXCGFQEXLSVYAGFEMQPKTYKDCKIALLNIELELK 842
LV F++ S YAGFE QPK +K+ KI L++ELELK
Sbjct: 215 LVKGVAFKKTFS-YAGFEQQPKFFKNPKILCLDVELELK 252
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 156 bits (379), Expect = 3e-39
Identities = 84/199 (42%), Positives = 131/199 (65%), Gaps = 6/199 (3%)
Frame = +1
Query: 136 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 309
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 310 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 489
HPAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+
Sbjct: 72 HPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT 131
Query: 490 IEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLP 669
++ +KE A+ I+ R+ LL+ A+T+++SK++ Q + + I VDAVL + P +
Sbjct: 132 VDCMKENALAIE----LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVA 187
Query: 670 LDM----IGIKKVPGGALE 714
++ I I K GG ++
Sbjct: 188 TNVDLKDIRIVKKLGGIID 206
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 147 bits (357), Expect = 2e-36
Identities = 85/198 (42%), Positives = 127/198 (64%), Gaps = 2/198 (1%)
Frame = +1
Query: 136 QTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHN-GKAVISNDGATIMKLLDIVH 312
Q +G+ +S+ V D V++TLGP+GMDK++ ++ G V++NDGATI+K + + +
Sbjct: 15 QERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDN 74
Query: 313 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 492
AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI
Sbjct: 75 AAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAI 134
Query: 493 EKIKEQAVKIDNKS-PEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLP 669
+ ++ A IDN S P + R L A T +SSK++ Q K+HF+++ VDAVL L
Sbjct: 135 DALR--ASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGS-TN 191
Query: 670 LDMIGIKKVPGGALEGLF 723
LD I I K+ GG L+ F
Sbjct: 192 LDNIQIIKILGGKLDDSF 209
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 143 bits (347), Expect = 3e-35
Identities = 73/176 (41%), Positives = 111/176 (63%), Gaps = 1/176 (0%)
Frame = +1
Query: 133 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 312
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 313 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 492
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 493 EKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 657
+ + + + +D+ E L+ A T+MSSK+I D FS + VDA+LS+ T
Sbjct: 135 KFMTDVLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKT 186
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 139 bits (336), Expect = 6e-34
Identities = 68/177 (38%), Positives = 116/177 (65%)
Frame = +1
Query: 121 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 300
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 301 DIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTAS 480
++ H AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A
Sbjct: 84 EVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKAC 143
Query: 481 RLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL 651
++A++ + + +D SPE + L + A T++ SK++ + DHF+ I VDAVLS+
Sbjct: 144 QVAVKHLDAISDVVD-FSPENTTN-LFRSAKTSLGSKVVSKAHDHFANIAVDAVLSV 198
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 135 bits (327), Expect = 7e-33
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Frame = +1
Query: 127 GTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 306
G Q K Q+ SNI A + V D +RT LGPR M K+++D G +++NDG I++ +++
Sbjct: 12 GNRQVGHKAQM-SNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEV 70
Query: 307 VHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRL 486
HPAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A
Sbjct: 71 AHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALED 130
Query: 487 AIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKD---HFSKIVVDAVLSLDT 657
A+ I E + ++ E L+ C T KL+ + D H + V V S
Sbjct: 131 ALSIIDEITLPVNVDDNAEMFRLIRTCIGT----KLVARWSDLMCHLALRAVRTVASTSN 186
Query: 658 PLLPLDM---IGIKKVPGGALE 714
+ +D+ ++KVPGG +E
Sbjct: 187 GRMEIDIKRYARVEKVPGGEIE 208
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 108 bits (260), Expect = 9e-25
Identities = 65/202 (32%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Frame = +1
Query: 121 REGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKL 297
REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI++
Sbjct: 15 REGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRE 74
Query: 298 LDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 477
L+++HPAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + + A
Sbjct: 75 LEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMA 134
Query: 478 SRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSL- 651
+E ++E A KI+ E++ L+K T +SSK + +D S +V A+L++
Sbjct: 135 LSHTMEVLEEICADKIETVESEKE---LIKAIRTCISSKQ-YGNEDFLSDLVAKAILTVL 190
Query: 652 --DTPLLPLDMIGIKKVPGGAL 711
D +D I + K+ G +L
Sbjct: 191 PKDPSKFNVDNIRVVKIMGSSL 212
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 104 bits (249), Expect = 2e-23
Identities = 59/187 (31%), Positives = 101/187 (54%)
Frame = +1
Query: 118 LREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKL 297
L + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 5 LNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTE 64
Query: 298 LDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTA 477
+ I +P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A
Sbjct: 65 MQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLA 124
Query: 478 SRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 657
A+ + + K D E R++LL A T++S+K+ + + + VVDA+L++
Sbjct: 125 KNEALTFL--DSFKTDF---EVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRR 179
Query: 658 PLLPLDM 678
P P+D+
Sbjct: 180 PDEPIDL 186
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 51.6 bits (118), Expect = 1e-07
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +1
Query: 196 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEV 363
AV TLGP+G + LI G I+ DG T+ + + + A+ + D+A +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVA 116
Query: 364 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 543
GDGTT+ +L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 26/120 (21%), Positives = 48/120 (40%)
Frame = +1
Query: 70 KDSETNLAKCNRKYFYLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH 249
+D+ T A N ++ T+ + P SN N+ LV D + P + +
Sbjct: 201 EDAATGAAVTNTTTTHITTSTNTSTVIP---SNPNSVFLV-DCTHSQC-PTDLPNIATTQ 255
Query: 250 NGKAVISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFV 429
+ + N A+ + +L+ HPAA + + S + D + + + K PFV
Sbjct: 256 HSLRYLDNASASAITVLERTHPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFV 315
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 541 EQRDLL---LKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 663
EQ D L LKC +S+LI +H + + V SLDTP+
Sbjct: 571 EQSDTLRAALKCIGEVRNSRLITHYLEHGNLDIPPEVSSLDTPI 614
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 514 VKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 657
V ++N PE ++ + C+ ++ Q DH ++V + + L T
Sbjct: 486 VYLENNDPEVRKTASITCSQLFARDPILSQTSDHAIQVVAEVLEKLLT 533
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.7
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = -3
Query: 440 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAMSTRVLAAG---*TISSNFMIVAPSF 270
T SST ++ ++ + PTS+S DF+ S +++G +I S F V+
Sbjct: 521 TSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSIL 580
Query: 269 -DITAFPL*STISLSIPRGPRVVLTASTTS 183
T+ P +++S+S +AST+S
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTFSSASTSS 610
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 726 GKESLKSSTGDLLDSNHVERQKWSVQRQDSINNNL 622
G E S+ D+ S H+E +WSV D + N+
Sbjct: 19 GMEINVPSSSDVWTSGHIEPLEWSVVSTDPLQANV 53
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 430 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 564
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 415 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 564
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,403,131
Number of Sequences: 5004
Number of extensions: 69562
Number of successful extensions: 226
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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