Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C08
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   4.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   4.0  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   7.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.1  

>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +1

Query: 439 VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHF 618
           + P V  R     +R   ++  E+   I+++SP  + DLL++  +   S K   +  + +
Sbjct: 1   LEPLVTWRLNDKCNRYNEDEEDEEDDFINSQSPSNEVDLLIQIGNGIFSQKGT-KFDERY 59

Query: 619 SKIVVDAVLSLDTPLLPLDMIG 684
            K+  D   S    L PLD +G
Sbjct: 60  DKLAKDLYKS---ELKPLDFVG 78


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -1

Query: 715  PQELHRGPS*FQSCREAEVECPKTGQHQQQS*RSDPSVDESVSMTSLLMHTS 560
            PQ+LHR     Q  ++ + +  +  Q QQQ  +  P   ++    S  ++TS
Sbjct: 1293 PQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSAPLNTS 1344


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -2

Query: 432 FNKRLQPLQNFTSQYHYRGGSITNLSVLRLCNVHK 328
           +NK ++P+QN T +   R G    L+ ++L NV++
Sbjct: 38  YNKLIRPVQNMTQKVDVRFG----LAFVQLINVNE 68


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 129  NGPDAGQAPARLQHQCLSTCCR 194
            +GPD  +    L  QCL   CR
Sbjct: 1038 SGPDRTEPDTLLDEQCLEELCR 1059


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,118
Number of Sequences: 2352
Number of extensions: 18504
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)