Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C06
         (918 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.27 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   4.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 21/85 (24%), Positives = 38/85 (44%)
 Frame = +1

Query: 505 PDTYYDNIEINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDAETLKLQ 684
           PD Y D+    +A EEA  + + S+T  +    D     + ++H      F +   + L 
Sbjct: 150 PDKYVDSKVFAKAREEATVVPEGSRTP-IEIPRDYTASDLEEEHR--LAYFREDLGINLH 206

Query: 685 NIDPRIKTMYEGVRDVLQKYRSGKL 759
           +    +   +E  R+V+ K R G+L
Sbjct: 207 HWHWHLVYPFEAAREVVAKNRRGEL 231


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 235 VGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKK 363
           V K +   +++E+  SVKIK   +DR   DED+    ++ +K+
Sbjct: 866 VKKEVDEEERLENHTSVKIKREAEDR---DEDERSFHSNGAKE 905


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 526 IEINEADEEALKLFKSSKTERVRTLADIIKEKITDK 633
           + + E D    KL+    +  V T+ D  KE  TDK
Sbjct: 195 VRVPEEDNPHAKLYDYDLSSHVITILDWTKEDGTDK 230


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 271 SGNSVKIKNRTKDRNRHDEDDEFVKADLS 357
           S NS  + ++ +DRN  D D+   + +++
Sbjct: 12  SENSTYLFDKHEDRNNTDRDENLARVEVA 40


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 274 GNSVKIKNRTKDRNRHDED-DEFVKADLSKKILKTARRQQAE 396
           G + ++ N+ K  +  DED D  + +DL+ KIL  A+++  E
Sbjct: 498 GRTGRVGNKGKATSFFDEDQDRNLASDLA-KILSQAKQEIPE 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,487
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)