Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C06
         (918 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061176-1|AAL28724.1|  436|Drosophila melanogaster LD14510p pro...   182   8e-46
AE014298-1081|AAF46289.1|  436|Drosophila melanogaster CG1430-PA...   182   8e-46
L02076-1|AAA28401.1|  240|Drosophila melanogaster bys protein.        166   3e-41
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro...    33   0.55 
AY069344-1|AAL39489.2|  985|Drosophila melanogaster LD05471p pro...    33   0.55 
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.      33   0.55 
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P...    33   0.55 
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA...    31   2.9  
AY118724-1|AAM50584.1|  570|Drosophila melanogaster GH02014p pro...    29   8.9  
AE014297-3518|AAF56273.2|  570|Drosophila melanogaster CG6356-PA...    29   8.9  

>AY061176-1|AAL28724.1|  436|Drosophila melanogaster LD14510p
           protein.
          Length = 436

 Score =  182 bits (442), Expect = 8e-46
 Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 2/241 (0%)
 Frame = +1

Query: 202 MGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTAR 381
           MGK KK   + + KN+ L  QI  G   K KN+ K + R +E    + A  S+KIL  A+
Sbjct: 1   MGKPKKANVATI-KNVNLEKQITEGRVAKNKNKDKVKLRAEESAN-IDARSSQKILAAAK 58

Query: 382 RQQAELEDNEIGPSPAKHVTLVXXXXXXXXXXXXXXXXXLEPDTYYDNIEINEADEEALK 561
            QQ EL D E  PS    VT+                   E D   D ++++E D  A +
Sbjct: 59  LQQLEL-DEENFPSL---VTVKKVNFSLNDGHVKEDEEVNETDLMAD-LDMDEDDVAAFE 113

Query: 562 LFKSSKTERVRTL--ADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTMYEGVRDVL 735
            F+    E  RTL  + +I +KI +K  ++ T+ SD  +LK++ IDP++K MYEGVRDVL
Sbjct: 114 RFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDEGSLKIEEIDPKVKEMYEGVRDVL 173

Query: 736 QKYRSGKLPKAFKMVPHLQNWEQILYLTEPTTWSAAAMYQATRIFASNLKEKMAQKXYNL 915
           ++YRSGK+PKAFK++P L+NWEQIL++TEP  WSAAAM+Q TRIF S L + MAQ+ YNL
Sbjct: 174 KRYRSGKIPKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCSVLSQAMAQRFYNL 233

Query: 916 V 918
           V
Sbjct: 234 V 234


>AE014298-1081|AAF46289.1|  436|Drosophila melanogaster CG1430-PA
           protein.
          Length = 436

 Score =  182 bits (442), Expect = 8e-46
 Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 2/241 (0%)
 Frame = +1

Query: 202 MGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTAR 381
           MGK KK   + + KN+ L  QI  G   K KN+ K + R +E    + A  S+KIL  A+
Sbjct: 1   MGKPKKANVATI-KNVNLEKQITEGRVAKNKNKDKVKLRAEESAN-IDARSSQKILAAAK 58

Query: 382 RQQAELEDNEIGPSPAKHVTLVXXXXXXXXXXXXXXXXXLEPDTYYDNIEINEADEEALK 561
            QQ EL D E  PS    VT+                   E D   D ++++E D  A +
Sbjct: 59  LQQLEL-DEENFPSL---VTVKKVNFSLNDGHVKEDEEVNETDLMAD-LDMDEDDVAAFE 113

Query: 562 LFKSSKTERVRTL--ADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTMYEGVRDVL 735
            F+    E  RTL  + +I +KI +K  ++ T+ SD  +LK++ IDP++K MYEGVRDVL
Sbjct: 114 RFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDEGSLKIEEIDPKVKEMYEGVRDVL 173

Query: 736 QKYRSGKLPKAFKMVPHLQNWEQILYLTEPTTWSAAAMYQATRIFASNLKEKMAQKXYNL 915
           ++YRSGK+PKAFK++P L+NWEQIL++TEP  WSAAAM+Q TRIF S L + MAQ+ YNL
Sbjct: 174 KRYRSGKIPKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCSVLSQAMAQRFYNL 233

Query: 916 V 918
           V
Sbjct: 234 V 234


>L02076-1|AAA28401.1|  240|Drosophila melanogaster bys protein.
          Length = 240

 Score =  166 bits (404), Expect = 3e-41
 Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 2/227 (0%)
 Frame = +1

Query: 202 MGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTAR 381
           MGK KK   + + KN+ L  QI  G   K KN+ K + R +E    + A  S+KIL  A+
Sbjct: 1   MGKPKKANVATI-KNVNLEKQITEGRVAKNKNKDKVKLRAEESAN-IDARSSQKILAAAK 58

Query: 382 RQQAELEDNEIGPSPAKHVTLVXXXXXXXXXXXXXXXXXLEPDTYYDNIEINEADEEALK 561
            QQ EL D E  PS    VT+                   E D   D ++++E D  A +
Sbjct: 59  LQQLEL-DEENFPSL---VTVKKVNFSLNDGHVKEDEEVNETDLMAD-LDMDEDDVAAFE 113

Query: 562 LFKSSKTERVRTL--ADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTMYEGVRDVL 735
            F+    E  RTL  + +I +KI +K  ++ T+ SD  +LK++ IDP++K MYEGVRDVL
Sbjct: 114 RFQQPAQEGKRTLHLSKMIMQKIQEKEADIHTKISDEGSLKIEEIDPKVKEMYEGVRDVL 173

Query: 736 QKYRSGKLPKAFKMVPHLQNWEQILYLTEPTTWSAAAMYQATRIFAS 876
           ++YRSGK+PKAFK++P L+NWEQIL++TEP  WSAAAM+Q TRIF S
Sbjct: 174 KRYRSGKIPKAFKIIPKLRNWEQILFITEPHNWSAAAMFQGTRIFCS 220


>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p protein.
          Length = 1190

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 520  DNIEINEADEEALKLFKSSKTERVRTLADIIKE---KITDKHTELQTQFSDAETLKLQN 687
            DN+E  +A+ +ALK+  SS    V  L   IKE   K+ D++ E++ Q    E +  +N
Sbjct: 854  DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKEN 912


>AY069344-1|AAL39489.2|  985|Drosophila melanogaster LD05471p
           protein.
          Length = 985

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 520 DNIEINEADEEALKLFKSSKTERVRTLADIIKE---KITDKHTELQTQFSDAETLKLQN 687
           DN+E  +A+ +ALK+  SS    V  L   IKE   K+ D++ E++ Q    E +  +N
Sbjct: 649 DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKEN 707


>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
          Length = 1179

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 520  DNIEINEADEEALKLFKSSKTERVRTLADIIKE---KITDKHTELQTQFSDAETLKLQN 687
            DN+E  +A+ +ALK+  SS    V  L   IKE   K+ D++ E++ Q    E +  +N
Sbjct: 843  DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKEN 901


>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
            protein.
          Length = 1179

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 520  DNIEINEADEEALKLFKSSKTERVRTLADIIKE---KITDKHTELQTQFSDAETLKLQN 687
            DN+E  +A+ +ALK+  SS    V  L   IKE   K+ D++ E++ Q    E +  +N
Sbjct: 843  DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKEN 901


>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
           protein.
          Length = 1465

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 36/169 (21%), Positives = 66/169 (39%)
 Frame = +1

Query: 193 ETNMGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILK 372
           + N  +  +  PS+  K   +    +  N        ++ + H + ++  K   SKK+ K
Sbjct: 167 QANKAEDDQDNPSKEDKPKKVVKNKKQTNKDGKPQTNEEYDHHQQHEKPAKTQKSKKLAK 226

Query: 373 TARRQQAELEDNEIGPSPAKHVTLVXXXXXXXXXXXXXXXXXLEPDTYYDNIEINEADEE 552
             ++Q+ + EDN  G    K                       E D   D +++ + D+E
Sbjct: 227 KQKQQEDDKEDN--GTEQEKKKPSPKSKAKKSDKSKIDSLMDNEEDAGED-LKMYQEDQE 283

Query: 553 ALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPR 699
             K  + +K    +T  D  +E   D+  E Q Q    + +KL NID +
Sbjct: 284 PQK--QKTKKSAKKTNKDSKEESGEDQ--EHQEQKKPLKKIKLDNIDTK 328


>AY118724-1|AAM50584.1|  570|Drosophila melanogaster GH02014p
           protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 785 CGTILKAFGNLPDLYFWSTSLTPSYMVFILGSIFCNF 675
           CG+   +FG L D +   +S T     FI+GS FC F
Sbjct: 177 CGSF--SFGILADKFGRKSSFTLGAAFFIVGSFFCTF 211


>AE014297-3518|AAF56273.2|  570|Drosophila melanogaster CG6356-PA
           protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 785 CGTILKAFGNLPDLYFWSTSLTPSYMVFILGSIFCNF 675
           CG+   +FG L D +   +S T     FI+GS FC F
Sbjct: 177 CGSF--SFGILADKFGRKSSFTLGAAFFIVGSFFCTF 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,930,136
Number of Sequences: 53049
Number of extensions: 544193
Number of successful extensions: 1727
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)