Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C06
         (918 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    25   0.96 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   5.1  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   6.8  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   6.8  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   6.8  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 743 YFWSTSLTPSYMVFILGSIFCNFKVSASEN*VCSSVC 633
           +F S  L  SY V    SI CN K    +  +C  +C
Sbjct: 10  FFLSVILITSYFVTPTMSIKCNCKRHVIKPHICRKIC 46


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 553 ALKLFKSSKTERVRTLADIIKEKITDKHTELQTQF 657
           A KLF      +V      +K  + DKH E Q ++
Sbjct: 2   AKKLFTCQLCGKVLCSKASLKRHVADKHAERQEEY 36


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 139 SIKKTVVFVKSFLTDHLVETNMGKVKKLKPSQVGKNLALADQ 264
           +IK  ++    F+     ET  G+  + + S    N+AL+DQ
Sbjct: 4   AIKALLIVCALFIYTVTAETEEGQSGRSRVSDEQLNMALSDQ 45


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 139 SIKKTVVFVKSFLTDHLVETNMGKVKKLKPSQVGKNLALADQ 264
           +IK  ++    F+     ET  G+  + + S    N+AL+DQ
Sbjct: 4   AIKALLIVCALFIYTVTAETEEGQSGRSRVSDEQLNMALSDQ 45


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 706 TMYEGVRDVLQKYRSGKLPKAFKM 777
           TMY G+ D +QK  +   P   K+
Sbjct: 79  TMYPGIADRMQKEITALAPSTMKI 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.132    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,489
Number of Sequences: 438
Number of extensions: 3695
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)