Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C05
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...   139   3e-33
AF098996-3|AAC68707.2|  349|Caenorhabditis elegans Serpentine re...    31   1.1  
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    30   1.9  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z95621-1|CAB09130.1|  357|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    28   7.6  
AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical...    28   7.6  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score =  139 bits (336), Expect = 3e-33
 Identities = 68/157 (43%), Positives = 101/157 (64%)
 Frame = +2

Query: 191 TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAAS 370
           TKEEELLL  +S   STK +  FY NA I+S  P++LF+ VH +EI  +++ + L    +
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGT 64

Query: 371 TWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADY 550
            +LL+LA +N K  LKH             +S + A DKKM+ KEK+ER L++KNEVAD 
Sbjct: 65  AYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADT 124

Query: 551 EATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 661
           E+T  S+FY N+L+LTI+++S+F++L    P  N ++
Sbjct: 125 ESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>AF098996-3|AAC68707.2|  349|Caenorhabditis elegans Serpentine
           receptor, class w protein79 protein.
          Length = 349

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 116 SFYLCFVKVKVTYLV-KMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIP 292
           SF+L F+     Y++ K SG+ +K        L+      +S   S  +YG  ++     
Sbjct: 111 SFWLGFMLAMTRYIIMKSSGRADKLARPSSGYLITFIISVISAALSGWYYGRYYLEKDQN 170

Query: 293 IWLFW 307
           +W+ W
Sbjct: 171 LWIMW 175


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 485 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 592
           K++ + EK  ++    N+  DY  TT  +FYN   F
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFF 281


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%)
 Frame = +2

Query: 233 VSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQ 412
           VS     LF   +FI++ I          L +  +I+    +    TW + ++Y N   +
Sbjct: 220 VSIAFYGLFQLLSFILALITYHPNLETSPLNLYRSILNLYYMPFIWTWAVTISYSNRVQK 279

Query: 413 LKHXXXXXXXXXXXXXMSRKLAD--DKKMSRKEKDERILWKKNEVADYEATTYSIFYNNA 586
           L               +    A    K+M +  +++R L    +  DY  TT  +FYN  
Sbjct: 280 LLEEYKNGLEIIIPCLLFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTL 339

Query: 587 LF 592
            F
Sbjct: 340 FF 341


>Z95621-1|CAB09130.1|  357|Caenorhabditis elegans Hypothetical
           protein VC27A7L.1 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -3

Query: 202 FFFCKSFVVLSRHFY*IGYFN----FYETQIK-AAYCSVARQLVRILYVSFLAFF 53
           F  C +F+VL +    +G+FN    F+  Q+K   +       + I+YV F+ F+
Sbjct: 5   FMLCFTFIVLFQSCLLVGFFNTIVFFFSFQVKFFRFIDNRSNFIAIIYVGFIHFW 59


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 485 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 592
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274


>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +2

Query: 149 TYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFW 307
           T  +K      K F K  +++L D+    + K   +   N      +P W FW
Sbjct: 178 TLPMKKHESQKKHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFW 230


>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
           protein C29A12.4 protein.
          Length = 1560

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 286 NSNLVVLEGTFIGNKHRNYLVYPSN 360
           ++NL++ +  FIGN   N LVYPS+
Sbjct: 581 SANLIIDDPIFIGNVPNNSLVYPSS 605


>Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical
           protein T21H8.3 protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 813 YTHNSFIFLXATVCLKCLILKLFVSRGALNFHLHLV 706
           Y H++ +FL A     CLIL    +  A NF + L+
Sbjct: 46  YYHSNLLFLVALNAASCLILAGLTAWSATNFFVQLI 81


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +2

Query: 131 FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSAL 256
           F+KV +T L +    + K+  K  ELL++   R  STK+SAL
Sbjct: 10  FLKVDLTRLAEDDETHQKSTKKHTELLIELIDRK-STKASAL 50


>AC024817-54|AAF59564.1|  229|Caenorhabditis elegans Hypothetical
           protein Y54G2A.27 protein.
          Length = 229

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +1

Query: 571 FLQ*RTFPDYCHLEQFLH---SAYIHTYS*LHCVSHGCIWTSCSTLHRNQ 711
           +LQ    P  C L   +H   S+YI+ YS LH +SH    T+ +T   N+
Sbjct: 63  YLQMLFRPSVCPLHPSIHLSSSSYIYIYSQLHMLSHNGGPTTTTTTTPNR 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,110,765
Number of Sequences: 27780
Number of extensions: 394189
Number of successful extensions: 1045
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)