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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C04
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248...    59   5e-09
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574...    59   5e-09
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333...    58   9e-09
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420...    46   5e-05
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223...    45   9e-05
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209...    42   7e-04
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801...    42   7e-04
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245...    38   0.008
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482...    38   0.008
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221...    38   0.014
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080...    37   0.025
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940...    36   0.043
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512...    36   0.057
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484...    30   2.2  
02_05_0956 - 33064104-33066425                                         30   2.9  
10_08_0705 + 20032111-20032437,20032525-20032896                       29   6.6  
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475...    29   6.6  
09_04_0747 + 19892090-19893304,19893471-19893602,19894168-198942...    28   8.7  

>04_03_0532 -
           16824394-16824447,16824545-16824665,16824748-16824875,
           16825457-16825603,16825682-16825807,16825895-16826160,
           16826259-16826453,16826577-16826657,16826756-16826830,
           16827270-16827530,16827633-16827719,16827844-16828060
          Length = 585

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
 Frame = +2

Query: 320 LGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ---IKIYLGDNE 490
           +G   L K++LK+G+     RP+ GD  ++ Y   + D       RD+    K  LG  E
Sbjct: 46  IGKQGLRKRLLKEGE--GWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGE 103

Query: 491 VLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
           V++G D  +  M +GE+ +  + P  AYGE G  P
Sbjct: 104 VIKGWDEGIKTMKKGEQAVFTVPPELAYGEAGSPP 138



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
 Frame = +2

Query: 335 LLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKR----DQIKIYLGDNEVLQG 502
           +LKK+LK+G+     RP  G + R+ +  K++D     +K     +  +    + +V++G
Sbjct: 284 ILKKVLKEGEGYE--RPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEG 341

Query: 503 LDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDTWLEAK 682
           LD  +  M +GE  +++L P+ A+G    K  + L +V                 W E +
Sbjct: 342 LDRTVVTMKKGEVALVRLPPQHAFGSTETK--QDLAVVP-----------ANSTVWYEVE 388

Query: 683 LVLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRALDILD 847
           LV  +  E+   D+   AEK+E   +++  GN W+   +   A + Y +A   ++
Sbjct: 389 LVSFE-KEKESWDLKDNAEKIEAAAKKKDEGNVWFKMGKYAKASKRYEKAAKYIE 442



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 27/95 (28%), Positives = 50/95 (52%)
 Frame = +2

Query: 311 QDVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNE 490
           +D+   G + KK+L +G +     P+  D   + YE +++D   +V K D ++  + D  
Sbjct: 159 KDICKDGGIFKKVLAEGHK--WENPKDLDEVLVKYEARLEDGT-VVSKSDGVEFAVKDGY 215

Query: 491 VLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
               L  A+  M +GE+ +L + P++ +GE G KP
Sbjct: 216 FCPALSKAVKTMKKGEKVLLTVKPQYGFGEQG-KP 249


>02_03_0280 -
           17256524-17256733,17256838-17256958,17257318-17257445,
           17257603-17257671,17257757-17257882,17257970-17258235,
           17258341-17258535,17258614-17258694,17258729-17258851,
           17258941-17259201,17260044-17260130,17260260-17260578
          Length = 661

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
 Frame = +2

Query: 320 LGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ---IKIYLGDNE 490
           +G   L KK++K+G+     RP  GD  ++ Y   + D       RD+    K  LG  +
Sbjct: 80  IGKEGLRKKLVKEGE--GWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQ 137

Query: 491 VLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
           V++G DL +  M +GE  I  + P  AYGE G  P
Sbjct: 138 VIKGWDLGIKTMKKGENAIFTIPPELAYGEDGSPP 172



 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
 Frame = +2

Query: 335 LLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKR----DQIKIYLGDNEVLQG 502
           +LKKIL +G+     RP    + R+    K++D    V +     +  +    +++V++G
Sbjct: 334 ILKKILHEGEGYE--RPSDCTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEG 391

Query: 503 LDLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDT--WLE 676
           LD A+  M +GE  ++ + P +A+G                DE +    ++ P++  + E
Sbjct: 392 LDKAVLSMKKGEVALVTIPPEYAFGS---------------DETRQDLSVVPPNSTVYYE 436

Query: 677 AKLVLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRALDIL 844
            +LV  D  E+   D+    EK+E   +++  GN W+  ++   A + Y +AL+ +
Sbjct: 437 VELVSFD-KEKESWDMKENTEKIEAAAKKKDEGNAWFKMEKYARASKRYGKALNFI 491


>08_02_1322 +
           26131395-26131599,26132382-26132468,26133119-26133372,
           26133430-26133526,26133613-26133693,26133782-26133976,
           26134093-26134182,26134296-26134471,26134565-26134687,
           26134799-26134945,26135027-26135163,26135247-26135364,
           26135462-26135518
          Length = 588

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
 Frame = +2

Query: 287 PEVKNDEWQDVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ- 463
           P +K  E +++ G   L KK+LK+G+      P+ GD   + Y   + D       RD+ 
Sbjct: 32  PPLKVGEEKEI-GKQGLRKKLLKEGE--GWETPEVGDEVEVHYTGTLLDGKKFDSSRDRG 88

Query: 464 --IKIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
              K  LG  +V++G DL +  M +GE  +  + P  AYGE G  P
Sbjct: 89  TPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDLAYGESGSPP 134



 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
 Frame = +2

Query: 311 QDVLGSGALLKKILKQGDEISGSRP-QRGDIC--RISYELKIKDSNNIVEKRDQIKIYLG 481
           +D+   G + KKILK+G++    +      +C   + YE +++D   ++ K +  +  + 
Sbjct: 155 KDICQDGGIFKKILKEGEKWENPKDLDELTLCIAVVKYEARLED-GTVISKSEGAEFTVK 213

Query: 482 DNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMG 586
           D      L  A+  M + E+ +L + P++ +GE G
Sbjct: 214 DGFFCPALAKAVKTMKKAEKVLLTVKPQYGFGENG 248



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +2

Query: 335 LLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKR----DQIKIYLGDNEVLQG 502
           +LKK+L +G      RP  G + ++    K++D     +K     +  +    + EV+ G
Sbjct: 285 ILKKVLTEGTGYE--RPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDG 342

Query: 503 LDLALTLMYRGEECILQLAPRFAYG 577
           +D A+  M  GE  ++ + P +A+G
Sbjct: 343 IDRAVLNMKNGEVALVTIPPEYAFG 367


>01_05_0372 +
           21541220-21541457,21541832-21541912,21542027-21542092,
           21543050-21543178,21544619-21544674,21545451-21545732
          Length = 283

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 28/91 (30%), Positives = 49/91 (53%)
 Frame = +2

Query: 314 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEV 493
           D+L +G++LKKI+K+      S     D   ++Y   ++D N+ V K +++++ L     
Sbjct: 50  DILENGSILKKIIKRPLP-DKSPSNHADTVIVNYNACLEDGNS-VSKSERLELNLASRTA 107

Query: 494 LQGLDLALTLMYRGEECILQLAPRFAYGEMG 586
           L+    A+  M  GEE I  + PR+A+G  G
Sbjct: 108 LK---YAVKTMREGEEAIFIVKPRYAFGAQG 135


>12_01_0295 +
           2235209-2235263,2236182-2236361,2236478-2236567,
           2236947-2237131,2237200-2237358,2237437-2237589,
           2237938-2238264
          Length = 382

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
 Frame = +2

Query: 341 KKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVE----KRDQIKIYLG-DNEVLQGL 505
           K+++K+G    G +P R   C + Y   ++ S++  E    ++  I++ LG + + + GL
Sbjct: 60  KQVIKEGH---GKKPSRFATCFVHYRAWVQGSSHKFEDTWQEQHSIELVLGKEKKEMTGL 116

Query: 506 DLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDTWLEAKL 685
            + ++ M  GE  +L +     YG+ G     S   V    +  Y+  +IG D   E   
Sbjct: 117 GIGVSNMRSGERALLHVNWELGYGKEG---SFSFPNVPPMADLVYEVELIGFDDVKEVPR 173

Query: 686 VLHD--WSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRAL 835
            L D    +      +++ E++E   RR+  GN ++   + + A+Q Y  A+
Sbjct: 174 KLTDNVKLQGKARSDMTVEERIEAADRRKIEGNEYFKEKKFEEAMQQYEMAI 225


>01_05_0366 +
           21419270-21419312,21420372-21420458,21420625-21420900,
           21421560-21421634,21421736-21421816,21422117-21422308,
           21422756-21422772
          Length = 256

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 42/91 (46%)
 Frame = +2

Query: 314 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEV 493
           D+     +LKKI+K   E    +    D   + Y+  + D  + V K + ++  L D   
Sbjct: 106 DIFKDEGILKKIVKNA-EPDRKQSHSSDFVFVKYDACLMDGTS-VSKSEGVEFSLTDGFF 163

Query: 494 LQGLDLALTLMYRGEECILQLAPRFAYGEMG 586
                 A+  M  GEE +L + P++A+GE G
Sbjct: 164 CPAFAHAVHTMKEGEEAVLIVKPKYAFGEQG 194


>01_05_0361 +
           21377080-21377281,21378619-21378705,21379862-21380134,
           21380304-21380378,21380470-21380550,21380837-21381034,
           21381145-21381234,21381310-21381467,21381619-21381741,
           21381891-21382034,21382175-21382285,21382583-21382624,
           21383043-21383261,21385319-21385627
          Length = 703

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = +2

Query: 314 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEV 493
           D+L    +LKKI+K+G  +   +P   D   ++Y   ++D  + V   + I+  L +   
Sbjct: 159 DILDDEGILKKIIKRG--LGSDKPCDLDEALVNYNACLEDGMS-VSMSEGIEFNLAEGFF 215

Query: 494 LQGLDLALTLMYRGEECILQLAPRFAYGEMG 586
                 A+  M  GEE +L + P + +GE G
Sbjct: 216 CPAFARAVETMTEGEEAVLIVKPEYGFGERG 246


>09_04_0633 -
           19123930-19124009,19124240-19124344,19124453-19124543,
           19124647-19124709,19126318-19126368,19126878-19126962,
           19127102-19127283,19128493-19128582
          Length = 248

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 389 RGDICRISYELKIKDSNNI---VEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLA 559
           +GD  ++ Y  K+ D  +     E+ D I+  LG  +V++G D  +  M  GE+  L++ 
Sbjct: 148 KGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIP 207

Query: 560 PRFAYGEMGLKP 595
            +  YG  G  P
Sbjct: 208 SKLGYGAQGSPP 219


>05_05_0095 -
           22347552-22347696,22347988-22348094,22348114-22348236,
           22348325-22348458,22348766-22348874
          Length = 205

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
 Frame = +2

Query: 305 EWQDVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQ----IKI 472
           E  D+ G G +LK ++++  + + +      +  + YE  + ++  + +   +       
Sbjct: 3   EVADLTGDGGVLKTVVRKAKDDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSF 62

Query: 473 YLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
            +G   V++  D+AL  M  GE   +   P +AYG  G  P
Sbjct: 63  EIGQGAVIKAWDIALRTMKVGEVAKITCKPEYAYGSAGSPP 103


>11_01_0294 +
           2212807-2212876,2213664-2213843,2214505-2214594,
           2215054-2215238,2215399-2215521,2215593-2215745,
           2216090-2216416
          Length = 375

 Score = 37.5 bits (83), Expect = 0.014
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
 Frame = +2

Query: 341 KKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVE----KRDQIKIYLG-DNEVLQGL 505
           K+++K+G    G +P +   C + Y   ++ S +  E    ++  I++ +G + + + GL
Sbjct: 65  KQVIKEGH---GKKPSKFATCFLHYRAWVQGSLHKFEDTWQEQHPIELVIGKEKKQMSGL 121

Query: 506 DLALTLMYRGEECILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDTWLEAKL 685
            + +  M  GE  +L +     YG+ G     S   V    +  Y+  +IG D       
Sbjct: 122 GIGVGNMRSGERALLHVGWELGYGKEG---SFSFPNVPPMADLLYEVELIGFD------- 171

Query: 686 VLHDWSEEPEHDVLSIAEKMEIGIRRRARGNWWYGRDEPQLAVQLYRRAL 835
              D  E      +++ E++E   RR+  GN ++   + + A+Q Y  A+
Sbjct: 172 ---DVKEGKARSDMTVEERIEAADRRKIEGNEYFKEKKFEEAMQQYEMAI 218


>01_06_1791 -
           39907362-39907453,39907682-39907753,39907941-39908045,
           39908212-39908302,39908787-39908849,39909448-39909497,
           39909632-39909716
          Length = 185

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +2

Query: 389 RGDICRISYELKIKDSN---NIVEKRDQIKIYLGDNEVLQGLDLALTLMYRGEECILQLA 559
           +GD  ++ Y   + D +   +  ++ D  +  LG+ +V++G D  L  M  GE+  L++ 
Sbjct: 57  KGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIP 116

Query: 560 PRFAYGEMGLKP 595
            +  YGE G  P
Sbjct: 117 AKMGYGERGSPP 128


>03_03_0065 +
           14192725-14192813,14193004-14193088,14193971-14194040,
           14194730-14194827,14194931-14195101,14196192-14196224,
           14196762-14196820,14197143-14197190,14197399-14197480,
           14198317-14198475,14199036-14199093,14199801-14199949,
           14200403-14200503,14200574-14200643,14201088-14201147,
           14201883-14201939,14202247-14202315,14202485-14202562,
           14202996-14203097,14203203-14203274,14203361-14203648
          Length = 665

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
 Frame = +2

Query: 311 QDVLGSGALLKKILKQGD-EISGSRPQRGDICRISYELKIKDS-------NNIVEKRDQI 466
           +D+LG G L+K+ +  G  E     P    + R+ Y+  + D          +    + +
Sbjct: 300 RDMLGDGRLIKRRVVDGKGEFPMDCPLHDSLLRVHYKGMLLDEPKSIFYDTRVDNHGEPL 359

Query: 467 KIYLGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
           +   G+  V +G ++ + LM  GE+ I+   P FAY +    P
Sbjct: 360 EFCSGEGLVPEGFEMCVRLMLPGEKSIVTCPPDFAYDKFPRLP 402


>01_05_0359 +
           21350580-21350829,21350990-21351064,21351156-21351236,
           21352633-21352830,21352930-21353019,21353096-21353253,
           21353350-21353472,21354989-21355096,21355530-21355826
          Length = 459

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 22/91 (24%), Positives = 43/91 (47%)
 Frame = +2

Query: 314 DVLGSGALLKKILKQGDEISGSRPQRGDICRISYELKIKDSNNIVEKRDQIKIYLGDNEV 493
           D+L +  +LKK +K+G  +   +P   D   ++Y   ++D  + V   + ++  L +   
Sbjct: 55  DILDNEGILKKTMKRG--VGNDKPCDLDEVLVNYNACLEDGMS-VSMSEGVEFNLAEGFF 111

Query: 494 LQGLDLALTLMYRGEECILQLAPRFAYGEMG 586
                 A+  M  GEE +L +   + +GE G
Sbjct: 112 CPAFARAVETMTEGEEVVLIVKLEYGFGERG 142


>01_06_1316 +
           36245368-36245507,36247229-36247315,36248334-36248439,
           36249028-36249204,36249296-36249375,36249432-36249440,
           36249474-36249566,36249788-36249947
          Length = 283

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 476 LGDNEVLQGLDLALTLMYRGEECILQLAPRFAYGEMGLKP 595
           +G+  V++  D+A+  M  GE   +   P +AYG  G  P
Sbjct: 153 IGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPP 192


>02_05_0956 - 33064104-33066425
          Length = 773

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 672 SHVSGPIIGPLYLGSSHCPTNPRLSPGL 589
           S V+G   GP  LGS H   N  L PGL
Sbjct: 602 SSVNGRAAGPFELGSGHVDPNNALDPGL 629


>10_08_0705 + 20032111-20032437,20032525-20032896
          Length = 232

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 707 EPEHDVLSIAEKMEIGIRRRARGNWWYGRD 796
           E E  V+   EKME+G+R  ++G  ++G D
Sbjct: 128 EGEKKVVEALEKMEVGLRECSKGKPFFGGD 157


>07_01_0635 +
           4753919-4754090,4754200-4754258,4754377-4754432,
           4754698-4754842,4755506-4755580,4755844-4755933,
           4756218-4756295,4757879-4758376,4758512-4758997
          Length = 552

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 491 VLQGLDLALTLMYRGEECILQLAPRFAYGEMGLK 592
           VL+GLDL +  M  G + ++ + P  AYG+ G++
Sbjct: 183 VLKGLDLGVEGMKVGGQRLIIVPPELAYGKKGVQ 216


>09_04_0747 +
           19892090-19893304,19893471-19893602,19894168-19894215,
           19894697-19894766,19894936-19894963,19896021-19896519
          Length = 663

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 542 CILQLAPRFAYGEMGLKPGESLGLVGQCDEPKYKGPIIGPDTWL 673
           C L   PR      GL P E++ +     +  +  P+IGPD +L
Sbjct: 68  CALLFFPRELVSSCGLYPSEAILIDEAWSQSIWDVPVIGPDDFL 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,549,265
Number of Sequences: 37544
Number of extensions: 440692
Number of successful extensions: 1151
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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