Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C03
(892 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 242 7e-63
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 230 3e-59
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 126 4e-54
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 190 5e-47
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 182 1e-44
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 150 5e-35
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 145 1e-33
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 132 1e-29
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 131 2e-29
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 123 7e-27
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 120 5e-26
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 116 1e-24
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 49 4e-12
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 69 2e-10
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 66 1e-09
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 61 3e-08
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 3e-08
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 2e-06
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 2e-06
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 3e-04
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 45 0.002
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.037
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 31 0.055
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 38 0.45
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 31 0.49
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.60
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 242 bits (593), Expect = 7e-63
Identities = 110/155 (70%), Positives = 124/155 (80%)
Frame = +1
Query: 223 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 402
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 403 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 582
Y TG E+NVEPVD+GPGAFRC+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 583 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
VFGAMKGAVDGGLN+PHS+KRFPGY AE+K FNA+
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNAD 193
Score = 80.6 bits (190), Expect = 5e-14
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +3
Query: 699 AHIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
AHIFG HVA+YMRSLE++DE+SFKRQFS+Y KLG+ AD +E IY K H+ + P
Sbjct: 197 AHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDP 251
Score = 79.0 bits (186), Expect = 2e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 230 bits (563), Expect = 3e-59
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 8e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 126 bits (305), Expect(2) = 4e-54
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +1
Query: 493 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 672
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 673 KFNAES 690
FNAE+
Sbjct: 158 TFNAEA 163
Score = 108 bits (260), Expect(2) = 4e-54
Identities = 46/53 (86%), Positives = 51/53 (96%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 375
+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 37 IVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +3
Query: 699 AHIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHE 845
AHIFG HVA+YM +LE +D ++FKRQFS+Y KLG+ AD IE IY K H+
Sbjct: 166 AHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHD 214
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 190 bits (462), Expect = 5e-47
Identities = 90/157 (57%), Positives = 110/157 (70%)
Frame = +1
Query: 220 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 399
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 400 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 579
AY+TG +YNVE + F+ LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 580 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAES 690
++F MKG DGG+NVPHS RF G+D ESK++NAE+
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEA 193
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 705 IFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTH 842
I G HVA+YM L+++DED +KRQFSK+ G+ AD + A Y K H
Sbjct: 198 ILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVH 243
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 182 bits (442), Expect = 1e-44
Identities = 80/160 (50%), Positives = 105/160 (65%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYA
Sbjct: 46 ITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYA 105
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
A Y+TG +Y+VE D F+C+LD GL RT+TG
Sbjct: 106 ATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTG 165
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAESTQ 696
ARVF A+KGAVDGGL++PH+ KRF GYD + K + ++ +
Sbjct: 166 ARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLE 205
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 123 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRL 215
V K Y RYQVKF RRR G KTDY AR+RL
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRL 45
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 150 bits (363), Expect = 5e-35
Identities = 75/163 (46%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYA
Sbjct: 60 VLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG------AFRCYLDVGL 558
AAY+TG V + G F+ LDVGL
Sbjct: 120 AAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGL 179
Query: 559 ARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
ARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+
Sbjct: 180 ARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAK 222
Score = 64.9 bits (151), Expect = 3e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
Score = 39.1 bits (87), Expect = 0.15
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 705 IFGLHVAEYMRSLEQD---DEDSFKRQFSKYXKLGVXADAIEAIYXKTH 842
IFG HVA+Y++ ++++ + D QFSKY V ++IE +Y K H
Sbjct: 228 IFGKHVADYLKQVKEEASSNPDEKCVQFSKYMAAKVLPESIEGMYKKAH 276
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 145 bits (352), Expect = 1e-33
Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YA
Sbjct: 326 IIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYA 385
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY+TG +NV+ F+ LD GL RTTTG
Sbjct: 386 AAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTG 445
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGY-----DAESKKFNAE 687
RVFG +KGA DGG+N+PHS RFPGY + ES K+ E
Sbjct: 446 NRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPE 487
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 200
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 699 AHIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKL--GVXADAIEAIYXKTH 842
A IFG H+ YM+ L+ ++F++QFSK+ K D++E ++ K H
Sbjct: 491 ARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSKTLEAAKVDSVEKLFTKVH 540
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 132 bits (319), Expect = 1e-29
Identities = 66/153 (43%), Positives = 93/153 (60%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYA
Sbjct: 37 IVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY+TG + N++ P F LD+GL R+T G
Sbjct: 97 AAYATG---LLLARRTLKTLKMDKFYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLG 151
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 675
RVF A+KGA DGG+++PH+ +RFPG+ ++ K
Sbjct: 152 NRVFAALKGAADGGIHIPHNNRRFPGFSVDNDK 184
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRL 36
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 131 bits (317), Expect = 2e-29
Identities = 74/172 (43%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
Frame = +1
Query: 181 KGKLIIMLVNASVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 360
+GK A ++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 361 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 531
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 532 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPE 193
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
Score = 50.0 bits (114), Expect = 8e-05
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHPRE 869
+I G+HVAEYM S++++D D +K F+ Y K + + IE +Y HE +P +
Sbjct: 198 NILGIHVAEYMASMKEEDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKIRKNPEK 253
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 123 bits (296), Expect = 7e-27
Identities = 64/143 (44%), Positives = 83/143 (58%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
+ QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY
Sbjct: 36 IQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYP 95
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY+TG EY + + P F+ LDVGLARTTTG
Sbjct: 96 AAYATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTG 150
Query: 577 ARVFGAMKGAVDGGLNVPHSIKR 645
A+VF MKGAVDGGL +PH++ R
Sbjct: 151 AKVFAVMKGAVDGGLFIPHNVCR 173
Score = 53.2 bits (122), Expect = 9e-06
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTH 842
+I G VA+YMR L+++ E+ + +QFS+Y K G+ AD++E IY H
Sbjct: 204 YILGGAVADYMRKLKKESEEKYNKQFSRYVKAGITADSLEKIYKDAH 250
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 120 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
K+VKN YF R+Q KF+RRRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 120 bits (289), Expect = 5e-26
Identities = 63/134 (47%), Positives = 76/134 (56%)
Frame = +1
Query: 271 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 450
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 451 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 630
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 631 HSIKRFPGYDAESK 672
HS KRFPGY + +
Sbjct: 124 HSEKRFPGYSVDEE 137
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 705 IFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
IFG HVA YM L+++D + +++QFS Y K G+ + A+E +Y K HE +P
Sbjct: 151 IFGAHVASYMEYLKEEDPERYRKQFSAYLKHGLESSALEDMYLKAHENIRKNP 203
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 116 bits (278), Expect = 1e-24
Identities = 63/156 (40%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 223 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 402
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 403 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRCYLDVGLARTTTGA 579
Y+TG Y+V + +D A R +LD+GLAR+T GA
Sbjct: 93 YATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 580 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
RVFGA+KGA D GLNVPHS +F G+ + F+A+
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKFYGHKPDG-SFDAK 185
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 705 IFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
IFG +++EYM+ L D + +K QFS Y K G+ + I IY + + P
Sbjct: 191 IFGYNISEYMKQLRDGDPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKIAEDP 243
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 135 KQYFKRYQVKFKRRREGKTDYYARKRL 215
+ Y K +QVK +RRREGKTDY R +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNM 30
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 48.8 bits (111), Expect(2) = 4e-12
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 526 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 654
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 45.6 bits (103), Expect(2) = 4e-12
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 250 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 414
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 38.3 bits (85), Expect = 0.26
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 150 RYQVKFKRRREGKTDYYARKRLGCSGQEQI 239
RY+V +RRREGKT+YY R RL SG+ ++
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 259 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/45 (71%), Positives = 38/45 (84%)
Frame = +1
Query: 553 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAE
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAE 115
Score = 36.7 bits (81), Expect = 0.79
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 705 IFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAI 827
I G +V +YM L ++DED++K+Q +Y K + D +E I
Sbjct: 121 IMGQNVVDYMCFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 68.9 bits (161), Expect = 2e-10
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Frame = +1
Query: 223 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 402
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 403 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 582
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLG-----------YYFGKDLIEKVKQSETYNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 583 VFGAMKGAVDGGLNVPHS---IKRFPGYDAESKKFNAESTQGL 702
F +MKG+VD G+N+PH+ I + + +SK+ E ++G+
Sbjct: 145 SFASMKGSVDSGINIPHNYNKIFKVKNNEIDSKELFNERSKGI 187
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 132 NKQYFKRYQVKFKRRREGKTDYYARKRL 215
N Y R+++K +RRR GKTDY R +L
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKL 36
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 65.7 bits (153), Expect = 1e-09
Identities = 46/132 (34%), Positives = 64/132 (48%)
Frame = +1
Query: 256 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXX 435
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGML----- 88
Query: 436 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 615
+ V+ ++ G G LD+GLAR GARVF A+KGAVD
Sbjct: 89 --------------------FAVKALNAGYG--EAILDIGLARAKPGARVFAALKGAVDA 126
Query: 616 GLNVPHSIKRFP 651
GL+VP+ P
Sbjct: 127 GLDVPYGESILP 138
Score = 37.1 bits (82), Expect = 0.60
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +3
Query: 150 RYQVKFKRRREGKTDYYARKRLGCSG 227
RY V F+RR EGKTDYY R L SG
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +1
Query: 493 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 672
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 673 KFNAE 687
+ +A+
Sbjct: 102 QLDAK 106
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect(2) = 3e-08
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 526 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 636
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 39.5 bits (88), Expect(2) = 3e-08
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 250 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 150 RYQVKFKRRREGKTDYYARKRLGCSGQEQI 239
RY+V +RRRE +TDY+ R RL SG+ ++
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKPRL 35
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 2e-06
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 526 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 651
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 28.3 bits (60), Expect(2) = 2e-06
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 256 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 414
R +VR+SN TCQ+ GD ++ + L R+G + + A+Y TG
Sbjct: 34 RAVVRVSNTQTTCQLINYDSTGDEVIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 223 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 324
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect(2) = 3e-04
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 256 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect(2) = 3e-04
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 526 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 651
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTH 842
+I+G HVA YM L +D+ + ++ FS Y K + D IE +Y K H
Sbjct: 16 YIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.037
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 544 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 651
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +3
Query: 150 RYQVKFKRRREGKTDYYARKRLGCSGQEQI 239
RY+V F+RRREG+T+Y+ R +L SGQ+++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 37.1 bits (82), Expect = 0.60
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 256 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 30.7 bits (66), Expect(2) = 0.055
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 532 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 636
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
Score = 29.1 bits (62), Expect(2) = 0.055
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 250 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
K+R +N +++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 48 KFRSYFTTTNTNLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 37.5 bits (83), Expect = 0.45
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 156 QVKFKRRREGKTDYYARKRLGCSGQEQI*HT*ISSDCASLQQRCNMP 296
+++F+R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 30.7 bits (66), Expect(2) = 0.49
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 265 VRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 414
V +SN++ Q+ +++GD ++ + +S L G K + A+Y TG
Sbjct: 33 VHISNENAQVQIHAPKMDGDVVIASGHSRYLASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.49
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 526 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 651
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.60
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 544 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 651
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
Score = 33.9 bits (74), Expect = 5.6
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 153 YQVKFKRRREGKTDYYARKRL 215
Y+V+FKRRREGKT+Y R +L
Sbjct: 7 YKVQFKRRREGKTNYNKRYKL 27
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,884,671
Number of Sequences: 1657284
Number of extensions: 16180438
Number of successful extensions: 39547
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39530
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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