Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_C03
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 230 4e-60
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 230 4e-60
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 230 4e-60
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 230 4e-60
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 230 4e-60
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 230 4e-60
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 228 2e-59
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 119 1e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 79 3e-14
DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM prote... 33 1.8
AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein. 33 1.8
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 30 9.8
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 30 9.8
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 230 bits (563), Expect = 4e-60
Identities = 104/157 (66%), Positives = 121/157 (77%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 200
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +3
Query: 99 FKNMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
F+ MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 5 FRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
Score = 54.4 bits (125), Expect = 5e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 205 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENP 257
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 228 bits (558), Expect = 2e-59
Identities = 103/157 (65%), Positives = 120/157 (76%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 193
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 251
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +1
Query: 259 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 438
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 439 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 618
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 619 LNVPH 633
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 119 bits (287), Expect = 1e-26
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +1
Query: 217 VVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
V+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AA 402
AA
Sbjct: 97 AA 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1
Query: 565 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 687
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAE
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAE 41
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +3
Query: 702 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTHEXSCDHP 863
HI G +VA+YMR L ++DED++K+QFS+Y K V D +E +Y K H ++P
Sbjct: 46 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 99
>DQ413174-1|ABD83327.1| 650|Homo sapiens actin-binding LIM protein
3 protein.
Length = 650
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +1
Query: 64 GVRLWTPLCNLDLRIWDSLKL*RTNNTSRGTK*NSRGVVKGKLIIMLVNASVVQDKNKYN 243
G +W P+C R LK RT+ TS +S G ++I V+ ++ K+
Sbjct: 253 GSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIG-SPNRVICAKVDNEILNYKDLAA 311
Query: 244 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 333
PK + I + D+ +SR D ++
Sbjct: 312 LPKVKSIYEVQRPDLISYEPHSRYMSDEML 341
>AB020650-1|BAA74866.2| 691|Homo sapiens KIAA0843 protein protein.
Length = 691
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +1
Query: 64 GVRLWTPLCNLDLRIWDSLKL*RTNNTSRGTK*NSRGVVKGKLIIMLVNASVVQDKNKYN 243
G +W P+C R LK RT+ TS +S G ++I V+ ++ K+
Sbjct: 261 GSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIG-SPNRVICAKVDNEILNYKDLAA 319
Query: 244 TPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 333
PK + I + D+ +SR D ++
Sbjct: 320 LPKVKSIYEVQRPDLISYEPHSRYMSDEML 349
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = -3
Query: 734 HVFSNMQTKDVSPCVLSALNFLDSAS*PGNLLME*GTLRPPSTAPFIAPKTRAPVVVRAK 555
H + K +P L + N + S++ + T++PP ++P R+ + +A
Sbjct: 525 HSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQAS 584
Query: 554 PTSK*HLNAPGPL 516
P H+ P PL
Sbjct: 585 PIPHPHVYQPPPL 597
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = -3
Query: 734 HVFSNMQTKDVSPCVLSALNFLDSAS*PGNLLME*GTLRPPSTAPFIAPKTRAPVVVRAK 555
H + K +P L + N + S++ + T++PP ++P R+ + +A
Sbjct: 525 HSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQAS 584
Query: 554 PTSK*HLNAPGPL 516
P H+ P PL
Sbjct: 585 PIPHPHVYQPPPL 597
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,211,726
Number of Sequences: 237096
Number of extensions: 2517503
Number of successful extensions: 4444
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4435
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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