Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_C03
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   190   2e-48
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    31   0.84 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.6  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  190 bits (462), Expect = 2e-48
 Identities = 90/157 (57%), Positives = 110/157 (70%)
 Frame = +1

Query: 220 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 399
           VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 400 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 579
           AY+TG                          +YNVE  +     F+  LD+GLARTTTG+
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156

Query: 580 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAES 690
           ++F  MKG  DGG+NVPHS  RF G+D ESK++NAE+
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEA 193



 Score = 71.3 bits (167), Expect = 8e-13
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +3

Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = +3

Query: 705 IFGLHVAEYMRSLEQDDEDSFKRQFSKYXKLGVXADAIEAIYXKTH 842
           I G HVA+YM  L+++DED +KRQFSK+   G+ AD + A Y K H
Sbjct: 198 ILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVH 243


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 499 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 675
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 676 F 678
           F
Sbjct: 128 F 128


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 343  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 230
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 343  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 230
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 238 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 357
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,189,493
Number of Sequences: 27780
Number of extensions: 404478
Number of successful extensions: 1090
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)