Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_B24
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 35 0.014
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 35 0.019
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 34 0.033
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 31 0.18
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.31
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 30 0.53
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 29 0.93
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 29 1.2
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 2.2
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 27 2.8
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 27 2.8
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 27 3.8
SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 5.0
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 5.0
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo... 26 6.6
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 6.6
SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase Ark1|Schizosa... 26 6.6
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 26 8.7
SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr ... 26 8.7
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 644 EANQKKIFLCDICGKTAVSKASLLTHMCTHENVFPYKCDVC 766
EA+ K + L + C K K ++ +H+ TH + PY+CD+C
Sbjct: 438 EADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLC 478
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 665 FLCDICGKTAVSKASLLTHMCTHENVFPYKCD 760
+ CD+C V L H+ HEN PY C+
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE 504
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 593 SLEESSSIPKPPKKTQKEANQKKIFLCDI--CGKTAVSKASLLTHMCTHENVFPYKCDVC 766
SL + S K + E+ + ++C C K +L +HM TH N P++C +C
Sbjct: 546 SLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSIC 605
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.9 bits (74), Expect = 0.033
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 599 EESSSIPKPPKKTQKEA--NQKKIFLCDICGKTAVSKASLLTHMCTHENVFPYKCDVCPY 772
E S+++ +K + + + K++F CD C K +L H H P C C
Sbjct: 7 ENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEI 66
Query: 773 K 775
K
Sbjct: 67 K 67
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 31.5 bits (68), Expect = 0.18
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 656 KKIFLC--DICGKTAVSKASLLTHMCTHENVFPYKCD 760
KKIF C + CGK + L H+ TH N P+ CD
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCD 56
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 581 LMKCSLEESS---SIPKPPKKTQKEANQKKIFLCDI--CGKTAVSKASLLTHMCTHENVF 745
+ C EE S P ++ + + ++ F+CD C K K+ L H H NV
Sbjct: 22 IFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVK 81
Query: 746 PYKC 757
P+ C
Sbjct: 82 PFSC 85
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 30.7 bits (66), Expect = 0.31
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 407 KTECDVD-YNRNEDSDKPQKEIDYSYKVPSPDFSDDNSESLNCSICNKQFCDATSYETHL 583
KT VD Y R + DK KEID Y++ + + S +SES + N++ A+S T
Sbjct: 60 KTTASVDRYGRPLNQDKATKEIDRLYELEN-EGSSSSSESSEIT-DNEEVASASSKSTKS 117
Query: 584 MKCSLEES 607
+ + EES
Sbjct: 118 EELTDEES 125
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.9 bits (64), Expect = 0.53
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +2
Query: 602 ESSSIPKPPKKTQKEANQ-KKIFLCDI--CGKTAVSKASLLTHMCTHENVFPYKCDVC 766
E S KP KK + F C C K+ K L H THENV + C C
Sbjct: 4 EESFTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFC 61
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/34 (23%), Positives = 19/34 (55%)
Frame = +2
Query: 509 DNSESLNCSICNKQFCDATSYETHLMKCSLEESS 610
+N ++ +CS CN+ F + H+ + L++ +
Sbjct: 51 ENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 29.1 bits (62), Expect = 0.93
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 473 YSYKVPSPDFSDDNSESLNCSICNKQFCDATSYETH 580
YS+ + D++E+ C +C K F T +E H
Sbjct: 226 YSHNAEAEKDGKDSTEAFYCEVCQKFFGKITVFEAH 261
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 512 NSESLNCSICNKQFCDATSYETH----LMKCSLEE-SSSIPKPPKKTQKEANQKK 661
NS + C +CNK F E H K +L + + I K K+ QK A K
Sbjct: 266 NSNPIMCMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEIKKHAKEAQKNAESNK 320
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.9 bits (59), Expect = 2.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 527 NCSICNKQFCDATSYETHL 583
NC +CNK+F +Y +H+
Sbjct: 71 NCEVCNKKFYSEGAYSSHM 89
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 815 DLLCTLNXSTGSTLCMGIRRIYKETR 738
DLLCT + G MG R++ KE R
Sbjct: 45 DLLCTAAKNHGEKQAMGSRKLIKENR 70
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/82 (19%), Positives = 36/82 (43%)
Frame = +2
Query: 293 TDHLSXXMCQSCLDLLNGCIMFREICQKNNEMLLEVSIKTECDVDYNRNEDSDKPQKEID 472
TD+ S +C L + + + Q + + + + + ++ R S+ P
Sbjct: 1151 TDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASENPW---- 1206
Query: 473 YSYKVPSPDFSDDNSESLNCSI 538
+ +++ SP F D E++ C+I
Sbjct: 1207 FWFEIDSPKFISDTLEAMICAI 1228
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 437 NEDSDKPQKEIDYSYKVPSPDFSDDNSE 520
N+D D Q E YSY D SD++S+
Sbjct: 608 NDDDDDYQDEESYSYASDDDDESDEDSD 635
>SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 5.0
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +2
Query: 560 ATSYETHLMKCSLEESSSIPKPPKKTQKEANQKKIFLCDICGKTAVSKASLLTHMCTHEN 739
+ +YE+HL K E + P K E N +C ICG+ + A L T
Sbjct: 223 SNNYESHLKK---GEVAFTELAPPKLPFEINVSTTDICKICGEKIKNPAVLSTGF----- 274
Query: 740 VFPYKC 757
VF Y C
Sbjct: 275 VFCYPC 280
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 392 LEVSIKTECDVDYNRNEDSDKPQKEIDYSYKVPSPDFS 505
L+ +K++C+V + + SD P +++ SY P S
Sbjct: 384 LDEKLKSQCNVSPSPSNISDAPPSKLNRSYSSPLASIS 421
>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 581 LMKCSLEESSSIPKPPKKTQKEANQKKIFLCDICGKTAVSKASLL 715
L+ C + + + PK KEA + K+ L + GKT S S+L
Sbjct: 82 LLSCKPQAAEDVLNSPK--MKEALKGKLILSILAGKTISSLQSML 124
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 629 KKTQKEANQK-KIFLCDICGKTAVSKASLLTHMCTHENVFPYKC 757
KK QK K ++C+ C + L H+ +H N P+ C
Sbjct: 57 KKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPCC320.13c |ark1|aim1, SPCC330.16|aurora-B kinase
Ark1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 161 LEKTTIIMCRICNEEKGEIPIFDNLVHQNIPEEIKHF 271
L K+ ++ +I + + EI I NL H+NI HF
Sbjct: 120 LHKSELVQSKIEKQVRREIEIQSNLRHKNILRLYGHF 156
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 744 FLINATYAHTKGRTGGXVEGT*KISLTVRNLSNVPXCP 857
+L+NA +++ R+ G + T + +T + P CP
Sbjct: 790 YLLNADFSYALKRSSGSNDNTIFVKITDLGYEHYPTCP 827
>SPBC8D2.13 |||SHQ1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 451
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 581 LMKCSLEESSSIPKPPKKTQKEANQKKIFLC 673
L++ + EE ++ K PK++ N K ++LC
Sbjct: 252 LLEFTSEEKEALAKLPKRSYLIDNPKNVYLC 282
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,350,903
Number of Sequences: 5004
Number of extensions: 69034
Number of successful extensions: 260
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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