Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B24
         (931 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    37   8e-04
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    26   1.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 37.1 bits (82), Expect = 8e-04
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 584 MKCSLEESSSIPKPPKKTQKEANQ-KKIFLCDICGKTAVSKASLLTHMCTHENVFPYKCD 760
           +KC   +S+   +   K   + ++ +K + C+ C   ++S   L +H+  H +  PYKCD
Sbjct: 327 IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCD 386

Query: 761 VC 766
            C
Sbjct: 387 QC 388



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
 Frame = +2

Query: 527 NCSICNKQFCDATSYETHLM----------KCSLEESSSIPKPPKK--TQKEANQKKIFL 670
           +C +C  +F  + S + H M          +C L  ++   K   +   Q      K   
Sbjct: 269 SCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIK 328

Query: 671 CDICGKTAVSKASLLTHMCTHENVFPYKCDVCPYKG*NRWTC*GYIKDLTYREKPFKC 844
           C  C  T   + S   H  THE    Y+C+ CPY   +      ++  L   +KP+KC
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLL-LHTDQKPYKC 385



 Score = 33.9 bits (74), Expect = 0.007
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +2

Query: 620 KPPKKTQ---KEANQK--KIFLCDICGKTAVSKASLLTHMCTHENVFPYKCDVC 766
           +P KKTQ   K   Q     ++C+ C  T+     L  H+ TH    P+KC VC
Sbjct: 107 EPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVC 160



 Score = 33.9 bits (74), Expect = 0.007
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +2

Query: 656 KKIFLCDICGKTAVSKASLLTHMCTHENVFPYKCDVC 766
           +K F C  C   +  K  L  HM  H    PY CDVC
Sbjct: 237 EKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVC 273



 Score = 33.1 bits (72), Expect = 0.012
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 632 KTQKEANQKKIFLCDICGKTAVSKASLLTHMCTHENVFPYKCDVCPYKG*NRWTC*G-YI 808
           KT  E    K   C +C +   + ASL  H+ TH    P++C  C     N +T  G  I
Sbjct: 147 KTHSEDRPHK---CVVCERGFKTLASLQNHVNTHTGTKPHRCKHCD----NCFTTSGELI 199

Query: 809 KDLTYR---EKPFKC 844
           + + YR   E+P KC
Sbjct: 200 RHIRYRHTHERPHKC 214



 Score = 32.7 bits (71), Expect = 0.016
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 671 CDICGKTAVSKASLLTHMCTHENVFPYKCDVCPYKG*NRWTC*GYIKDLTYREKPFKC 844
           C  C   +V  + L  H+ TH    P++C  C Y   +++    +++  T  EKP+ C
Sbjct: 214 CTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHT-GEKPYSC 270



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
 Frame = +2

Query: 524 LNCSICNKQFCDATSYETHLM--------KCSLEESSSIPKPPKKTQKEAN-QKKIFLCD 676
           + C  C+  F D  SY+ H          +C     +SI     ++    +  +K + CD
Sbjct: 327 IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCD 386

Query: 677 ICGKTAVSKASLLTHMCTHEN 739
            C +T   K  L  HM  + N
Sbjct: 387 QCAQTFRQKQLLKRHMNYYHN 407


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +2

Query: 416 CDVDYNRNEDSDKPQKEIDYSYKVPSPDFSDDNSESLNCSICNKQFCDATSYETHL 583
           CD+ Y       K + E+   +++ + +F       + C+IC+K F     Y+ H+
Sbjct: 354 CDMSYRTKLQYQKHEYEV---HRISNENFG------IKCTICHKLFSQRQDYQLHM 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,622
Number of Sequences: 2352
Number of extensions: 16147
Number of successful extensions: 35
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)