Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B21
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   4.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   4.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   9.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 522  HQTSMVMIRDILMYMDRVF 578
            H     +++DIL YMDR+F
Sbjct: 1328 HLPQRPILQDILYYMDRIF 1346


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -3

Query: 775 IPENHEHLTGVSESPDDPQLRLDVHEQQAPSSV*RR*SRMH 653
           +PE+++HLT   E+  D  L +++ + +      +R  + H
Sbjct: 148 MPESYDHLTTTLETRSDDDLTMELVKSKLLDEAQKRMEKSH 188


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 197  EKYFAKRQNTWQNEDQSFSYDYG 265
            +K  A+R+   +    SFSY+YG
Sbjct: 1001 QKLRARREQQRREHSNSFSYNYG 1023


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 668 MISNASITNNLISEDNEPKIVDIVNFILLNKNSVHIH 558
           ++ +  +   ++ E N+ K+   V F+ LN+  V IH
Sbjct: 563 IVESDRVGTQILKEMNKQKLPGEVTFMPLNRLQVKIH 599


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 876,000
Number of Sequences: 2352
Number of extensions: 19106
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)