Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B19
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1548 - 34313212-34313304,34313518-34313632,34314097-343142...    33   0.29 
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385...    29   6.3  

>04_04_1548 -
           34313212-34313304,34313518-34313632,34314097-34314287,
           34314391-34315379,34315989-34316136,34316349-34316424,
           34316946-34317110,34317196-34317286,34318069-34318153,
           34318256-34318411,34318479-34318586,34318713-34318811,
           34318927-34319036,34319139-34319208
          Length = 831

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 17/85 (20%), Positives = 42/85 (49%)
 Frame = +2

Query: 515 RQALLNGEDNVADAAVHKEATPFKQEDIKENSTKTDLVNANQDRLQSNKFVLTPDYIQQT 694
           +Q  L+ +  +     H    P  Q+ I + +++  ++N +   +Q+   +L+P  IQQ 
Sbjct: 434 KQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQNIQT---MLSPSAIQQQ 490

Query: 695 IKSALKQENLNPEIEEKLLQLQRYQ 769
           ++   + + +  + ++K+   Q YQ
Sbjct: 491 LQQLQQMQQVQNDQKQKIQPDQSYQ 515


>10_08_0614 - 19238064-19238132,19238381-19238407,19238436-19238510,
            19238637-19239317,19239423-19239554,19239676-19239723,
            19239828-19239878,19240015-19240134,19241121-19241261,
            19241701-19241865,19241981-19242160,19242314-19242445,
            19242536-19242643,19242779-19242883,19243217-19243321,
            19243407-19243463,19243991-19244010,19244299-19244377,
            19245021-19245080,19245562-19245615,19246535-19246600,
            19246938-19246990,19247361-19247450,19248152-19248249,
            19248348-19248721
          Length = 1029

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 620  DLVNANQD-RLQSNKFVLTPDYIQQTIKSALKQENLNPEIEEKLLQLQ-RYQERRMK 784
            D+ N  ++ +   N  V+       T+KS   +E  NPE E  L++L+ + QE + K
Sbjct: 926  DITNGTKENKADKNVAVVEKQLSDNTVKSLTAEEYRNPEFEPLLVRLKAKIQEMKEK 982


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,599,770
Number of Sequences: 37544
Number of extensions: 239423
Number of successful extensions: 569
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)