Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_B17
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.014
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.014
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.073
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.39
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.52
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.68
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 30 2.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 6.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.4
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.014
Identities = 26/108 (24%), Positives = 26/108 (24%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXXXPX 752
PPP P P P PP PP P P P P PP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR----FGPPG 329
Query: 753 XXSXXXXXXXXXXXPXXXPXXPPXPXXXXPXPXXXXXXPXXPPXXPXG 896
P P PP P PP P G
Sbjct: 330 MGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/102 (24%), Positives = 26/102 (25%), Gaps = 2/102 (1%)
Frame = +3
Query: 528 PPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXP--XXPXXXXX 701
PP T + PPP G PP P PP P P P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Query: 702 PXPPXXXXXXXPXXXPXXXSXXXXXXXXXXXPXXXPXXPPXP 827
PP P P P P PP P
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +2
Query: 575 PPXXRPXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXP-TPXXXXXPPXPXPX 751
PP PPP PP P P P P P PP P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 752 XXXPP 766
PP
Sbjct: 324 RFGPP 328
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/73 (26%), Positives = 19/73 (26%), Gaps = 5/73 (6%)
Frame = +3
Query: 510 GXPXXXPPXXXXXXXXTXKXXPPPXX-----GXPXXPPXPXPPXXXXXXXXPPXXXPXXX 674
G P PP PPP G P PP P PP P
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Query: 675 PXXPXXXXXPXPP 713
P P PP
Sbjct: 375 PSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.014
Identities = 26/108 (24%), Positives = 26/108 (24%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXXXPX 752
PPP P P P PP PP P P P P PP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR----FGPPG 339
Query: 753 XXSXXXXXXXXXXXPXXXPXXPPXPXXXXPXPXXXXXXPXXPPXXPXG 896
P P PP P PP P G
Sbjct: 340 MGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/102 (24%), Positives = 26/102 (25%), Gaps = 2/102 (1%)
Frame = +3
Query: 528 PPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXP--XXPXXXXX 701
PP T + PPP G PP P PP P P P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Query: 702 PXPPXXXXXXXPXXXPXXXSXXXXXXXXXXXPXXXPXXPPXP 827
PP P P P P PP P
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +2
Query: 575 PPXXRPXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXP-TPXXXXXPPXPXPX 751
PP PPP PP P P P P P PP P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 752 XXXPP 766
PP
Sbjct: 334 RFGPP 338
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/73 (26%), Positives = 19/73 (26%), Gaps = 5/73 (6%)
Frame = +3
Query: 510 GXPXXXPPXXXXXXXXTXKXXPPPXX-----GXPXXPPXPXPPXXXXXXXXPPXXXPXXX 674
G P PP PPP G P PP P PP P
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Query: 675 PXXPXXXXXPXPP 713
P P PP
Sbjct: 385 PSGHGMIPPPPPP 397
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.073
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPP 713
PPP P P P PP PP P P P P PP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 605 PPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXPTPXXXXXPPXPXPXXXXPPXXXP 778
PPP PP P P P P P PP P P PP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPP--PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 731 PPXPXPXXXXPPXXXPXXXXXXXXXXXXXXXXXXXXXXPXPXXXPPPXPP 880
PP P P PP P P P PPP PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPP 713
PPP P PP P PP P P P P PP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/66 (24%), Positives = 17/66 (25%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXX 695
P PP + PPP PP PP P P P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 696 XXPXPP 713
P P
Sbjct: 182 NPPRTP 187
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +3
Query: 459 GGXXKXXQKRGPXXXKXGXPXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXX 638
GG G G P PP PPP G P PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-PPPPGGFKG 782
Query: 639 XXXPPXXXPXXXPXXP 686
PP P P
Sbjct: 783 GPPPPPPPGMFAPMAP 798
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Frame = +3
Query: 573 PPPXXGXPXX---PPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXX 743
PPP G P PP P PP P P P P PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 744 XP 749
P
Sbjct: 773 PP 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/67 (26%), Positives = 18/67 (26%), Gaps = 4/67 (5%)
Frame = +2
Query: 590 PXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXP----TPXXXXXPPXPXPXXX 757
P PPP P P P P P P P PP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 758 XPPXXXP 778
PP P
Sbjct: 768 CPPPPPP 774
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +3
Query: 576 PPXXGXPXXPPXP--XPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXXXP 749
PP G P PP P PP PP P P P PP P P
Sbjct: 720 PPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +3
Query: 459 GGXXKXXQKRGPXXXKXGXPXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXX 638
GG G G P PP PPP G P PP P PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-PPPPGGFKG 782
Query: 639 XXXPPXXXPXXXPXXP 686
PP P P
Sbjct: 783 GPPPPPPPGMFAPMAP 798
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Frame = +3
Query: 573 PPPXXGXPXX---PPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXX 743
PPP G P PP P PP P P P P PP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 744 XP 749
P
Sbjct: 773 PP 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/67 (26%), Positives = 18/67 (26%), Gaps = 4/67 (5%)
Frame = +2
Query: 590 PXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXP----TPXXXXXPPXPXPXXX 757
P PPP P P P P P P P PP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 758 XPPXXXP 778
PP P
Sbjct: 768 CPPPPPP 774
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +3
Query: 576 PPXXGXPXXPPXP--XPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXXXP 749
PP G P PP P PP PP P P P PP P P
Sbjct: 720 PPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +3
Query: 459 GGXXKXXQKRGPXXXKXGXPXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXX 638
GG G G P PP PPP G P PP P PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-PPPPGGFKG 365
Query: 639 XXXPPXXXPXXXPXXP 686
PP P P
Sbjct: 366 GPPPPPPPGMFAPMAP 381
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Frame = +3
Query: 573 PPPXXGXPXX---PPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXX 743
PPP G P PP P PP P P P P PP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 744 XP 749
P
Sbjct: 356 PP 357
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/67 (26%), Positives = 18/67 (26%), Gaps = 4/67 (5%)
Frame = +2
Query: 590 PXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXP----TPXXXXXPPXPXPXXX 757
P PPP P P P P P P P PP P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 758 XPPXXXP 778
PP P
Sbjct: 351 CPPPPPP 357
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Frame = +3
Query: 576 PPXXGXPXXPPXP--XPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXXXP 749
PP G P PP P PP PP P P P PP P P
Sbjct: 303 PPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = -1
Query: 712 GGXGXXXXXGXXGXXXGXXXGGXXXXXXXXGGXGXGGXXGXPXXGGGXXXXVFXXXXXXX 533
GG G G G GG GG G GG G GGG +
Sbjct: 77 GGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGG 136
Query: 532 GGXXXGXPXXFXXG 491
G G P + G
Sbjct: 137 YGGMGGGPGGYGMG 150
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.52
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 558 TXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPP 713
T K PPP P P P P PP P P P PP
Sbjct: 469 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXX 695
P PP + PPP G P P PP PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 696 XXPXPP 713
P PP
Sbjct: 298 PPPPPP 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXP 704
PPP G P PP PP PP P P P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXX 695
P PP + PPP G P P PP PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 696 XXPXPP 713
P PP
Sbjct: 319 PPPPPP 324
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXP 704
PPP G P PP PP PP P P P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXX 695
P PP + PPP G P P PP PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 696 XXPXPP 713
P PP
Sbjct: 304 PPPPPP 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXP 704
PPP G P PP PP PP P P P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 605 PPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXPTPXXXXXPPXPXPXXXXPPXXXP 778
PPP PP P P P P P P PP P PP P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLP-VPPPPPLFSPSMILPPPPPP 1395
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 594 PXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPP 713
P PP P PP PP P P P PP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPP 1378
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPP 713
PP P PP P PP P P P P PP
Sbjct: 1347 PPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPX----PPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPX 740
PPP G PP P PP PP P P P P P P
Sbjct: 96 PPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPC 155
Query: 741 XXP 749
P
Sbjct: 156 FGP 158
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/86 (24%), Positives = 22/86 (25%), Gaps = 3/86 (3%)
Frame = +3
Query: 573 PPPXXGXPXXPPX---PXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXPPXXXXXXXPXX 743
PPP P P P PP PP P P P P PP P
Sbjct: 41 PPPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGP-PPCFGPACPPPC 99
Query: 744 XPXXXSXXXXXXXXXXXPXXXPXXPP 821
+ P P PP
Sbjct: 100 FGPACAPPAPIIVNGPPPCFGPACPP 125
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/125 (20%), Positives = 27/125 (21%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXX 695
P PP + P P PP P P PP P P
Sbjct: 24 PQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPP 83
Query: 696 XXPXPPXXXXXXXPXXXPXXXSXXXXXXXXXXXPXXXPXXPPXPXXXXPXPXXXXXXPXX 875
P P P P P P P P P P
Sbjct: 84 LASYPQNAVPVPAPPPAP---------YPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPP 134
Query: 876 PPXXP 890
PP P
Sbjct: 135 PPPPP 139
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +2
Query: 575 PPXXRPXXXXPPPXPPXPXXXXXXXPXXXPXXXPXXXXXXXXXXPTPXXXXXPPXPXP 748
PP P P P PP P P P P PP P P
Sbjct: 98 PPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/107 (21%), Positives = 23/107 (21%)
Frame = +3
Query: 528 PPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPX 707
PP PPP P P PP P P P P
Sbjct: 52 PPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPA 111
Query: 708 PPXXXXXXXPXXXPXXXSXXXXXXXXXXXPXXXPXXPPXPXXXXPXP 848
PP P P P PP P P P
Sbjct: 112 PPPAPYPQHAVPAPAPYQ------QQPPPPPPPPHYPPPPPHYPPPP 152
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 558 TXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXP 710
T K PPP P P P P PP P P P P
Sbjct: 462 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXP 710
PPP PP P PP PP P P P P P
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP---PCQRPQPPQPQPQPYP 136
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXP 710
PPP PP P PP PP P P P P P
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP---PCQRPQPPQPQPQPYP 136
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 573 PPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXPXXPXXXXXPXP 710
PPP PP P PP PP P P P P P
Sbjct: 94 PPPPRNNCLPPPGPPPPCQQYQQPQPP---PCQRPQPPQPQPQPYP 136
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.4
Identities = 29/142 (20%), Positives = 29/142 (20%), Gaps = 2/142 (1%)
Frame = +3
Query: 489 GPXXXKXGXPXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXP- 665
GP P PP PP G PP PP PP P
Sbjct: 153 GPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPT 212
Query: 666 -XXXPXXPXXXXXPXPPXXXXXXXPXXXPXXXSXXXXXXXXXXXPXXXPXXPPXPXXXXP 842
P P P P P P P P
Sbjct: 213 GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 272
Query: 843 XPXXXXXXPXXPPXXPXGRXXP 908
P P P P G P
Sbjct: 273 GPFDPSGAP--PSGGPPGPFDP 292
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/54 (25%), Positives = 15/54 (27%)
Frame = +3
Query: 516 PXXXPPXXXXXXXXTXKXXPPPXXGXPXXPPXPXPPXXXXXXXXPPXXXPXXXP 677
P PP + PP P PP PP PP P P
Sbjct: 378 PKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPTTEPPNIP 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.156 0.577
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,504,608
Number of Sequences: 27780
Number of extensions: 152176
Number of successful extensions: 1108
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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