Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B16
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0594 - 30473915-30474533,30474667-30474962                       29   3.9  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   5.2  
10_08_1055 + 22587122-22587501,22587578-22588097                       29   6.9  
04_04_1019 + 30166514-30166585,30167207-30167841,30168505-301686...    29   6.9  
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462...    29   6.9  

>01_06_0594 - 30473915-30474533,30474667-30474962
          Length = 304

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 528 PFPRPLTRCXRSSGCGXRYQLTQGR 602
           PFPR   RC  S GC  R Q+ + R
Sbjct: 96  PFPRAYYRCSSSKGCPARKQVERSR 120


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = +3

Query: 780  PXGTXKXPXXFPLXXPSXXXPFXSXPXPFTXXPXPPFSP 896
            P    + P   P   P    P    P P T  P PP SP
Sbjct: 1139 PPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSP 1177


>10_08_1055 + 22587122-22587501,22587578-22588097
          Length = 299

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 528 PFPRPLTRCXRSSGCGXRYQLTQGR 602
           P+PR   RC  S GC  R Q+ + R
Sbjct: 169 PYPRGYYRCSSSKGCSARKQVERSR 193


>04_04_1019 +
           30166514-30166585,30167207-30167841,30168505-30168645,
           30169604-30170300
          Length = 514

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 528 PFPRPLTRCXRSSGCGXRYQLTQGR 602
           P+PR   RC  S GC  R Q+ + R
Sbjct: 280 PYPRGYYRCSSSKGCSARKQVERSR 304


>02_05_0410 +
           28744716-28744841,28745361-28745965,28746151-28746270,
           28746597-28746737,28748626-28749370
          Length = 578

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 528 PFPRPLTRCXRSSGCGXRYQLTQGR 602
           P+PR   RC  S GC  R Q+ + R
Sbjct: 328 PYPRGYYRCSSSKGCSARKQVERSR 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,515
Number of Sequences: 37544
Number of extensions: 182141
Number of successful extensions: 228
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)