Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B12
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1117 - 11922304-11922423,11922673-11922801,11923070-119231...    33   0.42 
03_05_1005 + 29626662-29627354,29628478-29628551,29628821-296289...    31   1.7  

>12_01_1117 -
           11922304-11922423,11922673-11922801,11923070-11923155,
           11923724-11923863,11923888-11924119,11924297-11924733,
           11925240-11925559
          Length = 487

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 651 RRMRHRTETAATKTSRPRQIIVREHTKDRCVRMNNGAICSIYL 523
           +  RHR     TK  R R+ I+R+H    CV  ++G     Y+
Sbjct: 315 KAQRHRVVAQGTKVHRSRRGIMRKHAVQECVLKSDGGCSCTYM 357


>03_05_1005 +
           29626662-29627354,29628478-29628551,29628821-29628963,
           29629051-29629097,29629176-29629284,29629364-29629425,
           29629791-29629905,29630375-29630535
          Length = 467

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 796 PSAWRCGPPARARPHACC*RQRTPPP 719
           P+AW  GP     PH    R R PPP
Sbjct: 106 PTAWHVGPTIVVGPHGAVVRIRAPPP 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,591,152
Number of Sequences: 37544
Number of extensions: 460691
Number of successful extensions: 1137
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)