Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B12
         (912 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 315 HPLSYSHHSCTDVLCSYVHRI 253
           +PL YS   CT  + SY HRI
Sbjct: 61  YPLPYSGSKCTWTITSY-HRI 80


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 557 RTHRSLVCSRTIICRGRDVL 616
           R H+  VCS+T I  G+ V+
Sbjct: 174 RPHKCTVCSKTFIQSGQLVI 193


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 657 DLRRMRHRTETAATKTSRPRQIIVREHTKDRCVR 556
           DL + +  T  A ++  RP+     E ++D C++
Sbjct: 395 DLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 657 DLRRMRHRTETAATKTSRPRQIIVREHTKDRCVR 556
           DL + +  T  A ++  RP+     E ++D C++
Sbjct: 395 DLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 657 DLRRMRHRTETAATKTSRPRQIIVREHTKDRCVR 556
           DL + +  T  A ++  RP+     E ++D C++
Sbjct: 395 DLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLK 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,220
Number of Sequences: 438
Number of extensions: 4900
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)